Is there a function in Mathematica for binning 2D data?

In summary, if you have 1D data then BinLists[] would group your data. For 2D data perhaps GatherBy[] with a function you construct that takes the First[] of your pair and returns an integer which represents the bin you would like the data to go into. Piecewise[] might be appropriate to construct that function, but you would need to figure out how to use that.Thanks, I'll give it a shot.
  • #1
Niles
1,866
0
Hi

Say I have a data set (x_i, y_i) such as of the form

{
{4.4077, 8.41282*10^-7},
{9.39964, 3.3636*10^-6},
{14.3781, 7.56237*10^-6},
{19.3462, 0.00001343},
{24.3073, 0.0000209557},
}

The first coordinate is time, the second a weight. The sum of the
weights equal 1, so I am dealing with a probability density function.
I want to bin all the data points such that data points with their x-
coordinates within some range delta_x are binned together, and the
total y-coordinate of that bin should be the sum of all the y's of the
data points in the respective bin. So basically something like a
histogram.

Is there a function for doing this in Mathematica?

Best regards.
Niles.
 
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  • #2
If you had 1D data then BinLists[] would group your data.

For 2D data perhaps GatherBy[] with a function you construct that takes the First[] of your pair and returns an integer which represents the bin you would like the data to go into. Piecewise[] might be appropriate to construct that function, but you would need to figure out how to use that.
 
  • #3
Thanks, I'll give it a shot.Niles.
 
  • #4
A question very similar to yours came up here

http://groups.google.com/group/comp...0b8d57a04?lnk=gst&q=binlists#60059c90b8d57a04

and there is some useful information there. For example, a person points out that BinLists can handle a list of vectors, not just a list of scalars. If you click on

http://reference.wolfram.com/mathematica/ref/BinLists.html

and then click on More Information and later on Scope then you can see some examples of how it can handle vectors. I missed this completely on my first reading because I didn't drill down into those subsections. But even after reading it I am uncertain how to use this do do exactly what you are looking for.
 
  • #5
I have explained the background behind why I am doing this operation here: https://www.physicsforums.com/showthread.php?t=581194. If it turns out that my reasoning has been wrong, then maybe I won't even have to do the binning. But I have to wait and see what smarter people would do.

Thanks for taking the time.Niles.
 
Last edited:
  • #6
Having no idea what your density function is, either for position or velocity, I don't know whether this would be possible or not, but I will ask.

Is there any way you could define distributions for position and velocity and then apply (not in the Mathematica sense) the velocity to the position and come up with new distributions for the resulting position and velocity?

If you could do that then it sounds like that might accomplish what I think you are trying to do, although you might not have thought of it in these terms.

I ask because years ago I had a good application for being able to simulate with the fundamental elements being distributions, not a sample of scalars. I didn't spend the time to track down whether anyone had found a good way of doing this or determined that it was not feasible.
 
  • #7
It is a Maxwell-Boltzmann distribution. I only look at the velocity, so I don't see any way to implement your idea, but it is a good suggestion. I will keep thinking about this.

Worst case, I guess the easiest way is just to use a couple of loops. I just thought Mathematica might have some smart function to do it for me - it usually does!
 
  • #8
If you want to post a VERY simple example, "here are 3 position, velocity pairs as input and what I would like to have are these 3 position, velocity as output" or some other very simple tangible example without a lot of irrelevant details to wade through then someone might be able to show you a line or a few lines that would do what you want to do.
 
  • #9
Sorry for not replying until now, but I believe I have fixed my problem. What I noticed was that all the "degenerate" data points were bunched around some value X, so I just divided the data into two lists - one with points near X and points far from X. From there on the binning is trivial.

However, this has produced a new problem regarding interpolating functions. I think it is best I create a new thread about this. But thanks for helping me this far, that was very kind of you.Niles.
 

What is binning in Mathematica?

Binning in Mathematica refers to the process of dividing a continuous set of 2D data points into discrete groups or "bins" based on their values. This is often used for data analysis and visualization purposes.

How do I bin 2D data in Mathematica?

To bin 2D data in Mathematica, you can use the BinningFunction option in functions such as Histogram or DensityHistogram. This option allows you to specify the binning method and bin size or number of bins.

What are the different binning methods available in Mathematica?

Some of the binning methods available in Mathematica include "Fixed" (equally spaced bins), "Sturges" (based on the number of data points), and "Scott" (based on the standard deviation of the data).

Can I customize the appearance of bins in my 2D data plot?

Yes, you can use the BinCounts function to get the number of data points in each bin and then use this information to create custom bin colors or labels in your plot.

How do I choose the appropriate bin size for my data?

The appropriate bin size for your data depends on the nature of your data and the purpose of your analysis. You can experiment with different bin sizes and methods to see which one gives the most meaningful representation of your data.

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