New Reply

16S rRNA sequence information to identify organisms

 
Share Thread
Nov26-12, 05:55 AM   #1
 

16S rRNA sequence information to identify organisms


Hi All,
I have an unknown 16S ribosomal RNA gene sequence below that I am trying to identify. I know its a bacteria but anyone know of a site/program online that allows you to enter the sequence below and it gives the likely close match?




TAGGGAATCTTCCGCAATGGACGAAAGTCTGACGGA
GCAACGCCGCGTGAACGATGAAGGCCTTCGGGTCGT
AAAGTTCTGTTGTTAGGGAAGAACAAGTATCGGAGTA
ACTGCCGGTACCTTGACGGTACCTAACCAGAAAGCC
ACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT
AGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAG
CGCGCGCAGGCGGTCCTTTAAGTCTGATGTGAAAGC
CCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGG
GGACTTGAGTACAGAAGAGGAAAGCGGAATTCCACGT
GTAGCGGTGAAATGCGTAGAGATGTGGAGGAACACCA
GTGGCGAAGGCGGCTTTCTGGTCTGTAACTGACGCTG
AGGCGCGAAAGCGTGGGGAGCAAACA
PhysOrg.com biology news on PhysOrg.com

>> Millions of moths mass on Madrid
>> Pesticides significantly reduce biodiversity in aquatic environments
>> New way to improve antibiotic production
Nov26-12, 08:44 AM   #2
 
You can NCBI's BLAST

http://blast.ncbi.nlm.nih.gov/
New Reply

Similar discussions for: 16S rRNA sequence information to identify organisms
Thread Forum Replies
Can you Identify a Pattern in this Sequence? General Math 2
what do organisms need to survive? Biology 3
Proving a sequence diverges with limited information Calculus 1
Organisms respond to quantum information Biology 1
Organisms Biology 2