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Solvent accesable surface area

  1. Dec 5, 2007 #1
    Hi,

    what do you think is the best method to determine/calculate in a
    computationally efficient way the solvent accessible surface area in
    phenomena like protein folding or protein-ligand docking ?

    Thanks
     
  2. jcsd
  3. Dec 5, 2007 #2

    jim mcnamara

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    Staff: Mentor

    This is not my discipline but I recall reading about Midas and MidasPlus a while ago. I think you can still look at the code and see what is going on.

    Here is an overview paper, you might take a look, it has a link to MidasPlus.
    http://www.netsci.org/Science/Compchem/feature14e.html
     
  4. Dec 14, 2007 #3
    do you know where the code can be found ?

     
  5. Dec 14, 2007 #4

    jim mcnamara

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    Staff: Mentor

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