The Fourier transform of a wavefunction is used to analyze the wavefunction in momentum space, not to directly obtain probability densities. The wavefunction itself is complex, making it unsuitable as a probability or probability density, which must be real and fall between 0 and 1. For position probability density, the wavefunction is squared and integrated without needing a Fourier transform. The probability density for momentum can then be derived from the Fourier transform of the wavefunction. Thus, the Fourier transform is specifically relevant for momentum analysis, not for calculating position probabilities.