HOW THINGS STAND (clues in
bold are as yet unsolved):
1. Dangerous brakemen. - solved by neutrino
Answer = Berkeman: anagram of "brakemen"
2. Be a moron, silly! - solved by neutrino
Answer = Moonbear: anagram of "be a moron"
3. Mosul chai. - solved by MIH
Answer = kurdt: Mosul is a town in Kurdistan, chai = tea -> T, kurd + t = kurdt
4. Cut SONAR, then put it back together. - solved by fuzzyfelt
Answer = Astronuc: anagram of "cut sonar"
5. Recall the tropical herb. - solved by neutrino
Answer = lisab: trpoical herb = basil, reverse it to get lisab
6. A weather vane scholar, in hiding - solved by neutrino
Answer = vanesch: hidden clue
vane scholar
7. Am I hot inside? - solved by kurdt
Answer = MIH: A
m I hot (hidden clue)
8. AP: Prez. screwed up! - solved by neutrino
Answer = Zapper: anagram of "AP Prez"
9. The Terrible ruler of the ocean, we hear. - solved by MIH
Answer = Ivan Seeking: Ivan is from Ivan the Terrible (first Tsar of Russia), and "ruler of the ocean" = sea king, which sounds like (hence, "we hear") Seeking
10. A way hot tum - solved by Borek
Answer = Redbelly: "way hot", as in red hot, and "tum" = tummy = belly ( I know it's kinda lame, but's its part of a set-up)
11. My God! Be physical, but in shorts. - solved by Borek
Answer = mgb phys: "short" forms of "My God", "be" and "physical" are MG (like in OMG), B and phys
12. They whip it good, but not half grand - solved by fuzzyfelt
Answer = Evo: "Whip it" is a single by the band Devo, half grand = D in Roman numerals, Devo - D = Evo
13. Living under the lighthouse, she was a martyr to logic. - solved by fuzzyfelt
Answer = hypatia: direct clue; look up Hypatia (alt. Hyapatia) of Alexandria, if you don't know the story
14. Somehow, Mendeleev's Scandium is lacking an O. - solved by kurdt
Answer = Borek: Mendeleev predicted the existence of the element Scandium, and named it Ekaboron; ekaboron - "an o" = ekbor = Borek, after unscrambling
15. Chromium is too! - solved by cristo
Answer = cristo: Chromium = Cr, so "Cr is too". Is
what too? Is lacking an O, naturally. So, cristoo - o = cristo
16. "No, not any!" he rages.
17. In part, M and N are the middle letters.
18. In longer DNA, he is transcribed backwards. - solved by cristo
Answer = Andre: in "long
er dna" is erdna, which reversed, makes andre
19. Antonius, who wanted your aures.
20. It is not beneath him to interact like -(1/r)e
-mr - solved by George
Answer = LowlyPion: the expression is the famous Yukawa potential - see
wiki, and being lowly, there's not much that's "beneath him"
21. Same clue as 10, strangely
22. Eta prime? - solved by Borek
Answer = Chi Meson: The Eta Prime is a subatomic particle sometimes referred to as the Chi Meson.
23. Is my junior New York Democrat insane? - solved by neutrino
Answer = jimmysnyder: anagram of is+my+jr+NY+dem
24. kcascti crmnfe - solved by chaoseverlasting
Answer = Vanadium: K, Ca, Sc, Ti, [missing] V [/missing], Cr, Mn, Fe are elements of the 4th period, and V is Vanadium
25. Other AZ Sen. follows chariot racer's dad?
26. Heels broke in the afternoon - returned.
27. Eetu, for a Fin. - solve by George
Answer = Edward: See wiki ->
Edward, in other languages
28. First course at the the atomic cafe? - solved by George
Answer = Proton Soup (self explanatory)
29. μα'θημα: know front to back. - solved by Chi Meson (explanation from George)
Answer = Mathwonk: The Greek μάθημα (máthēma) is the origin of the word math(ematics), and you get wonk if you turn "back" the word "know"
30. Meh ... cooties is gone, somehow.
Note: I've made a small change in 26.