E.coli with minimal media problem, HELP

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SUMMARY

The discussion focuses on solving a genetics problem involving E. coli strains that cannot synthesize five specific compounds. The solution requires understanding gene order through recombination analysis, specifically assuming only double cross-overs. Participants are advised to create a gene map to visualize possible recombinations and phenotypes based on the given data. The emphasis is on predicting recombinant phenotypes by excluding certain genes while fixing others.

PREREQUISITES
  • Understanding of E. coli genetics and metabolic pathways
  • Knowledge of genetic recombination and crossover events
  • Familiarity with constructing genetic maps
  • Basic principles of phenotype analysis in microbiology
NEXT STEPS
  • Study genetic mapping techniques in E. coli
  • Learn about double crossover events and their implications in genetics
  • Research methods for predicting phenotypes based on genetic data
  • Explore tools for visualizing genetic recombination outcomes
USEFUL FOR

Students and researchers in genetics, microbiologists working with E. coli, and anyone involved in genetic mapping and recombination analysis.

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Homework Statement


in the picture/attached file



Homework Equations


no equations necessary


The Attempt at a Solution


don't know how to start it off. I know the E.coli strain can't make the 5 compounds and the colonies present indicate which gene it's missing but I don't know how to determine the gene order from the data.

can someone give me a hint, please?

thanks
 
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Can you post the a link to the picture or explained the data?

The attached file is not present.
 
sorry about that, here's the file.
 

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  • mininal media question.GIF
    mininal media question.GIF
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That's classical way to do genetics.

The solution is based on recombination and the chance of unique, double, triple, quadruple, etc, cross-over to occur. In that problem you'll have to assume that only double cross-over occurred. Triple and quadruple are very unlikely and single would destroy the chromosome.

So to start it up, you need to draw a map of all possible gene order (painful task) and look at all the possible location for cross-over and predict the possible recombinant and phenotype.

For example

Donor DNA___A______B______C_________D________E_____
Cross-over_1______2_____3_______4_________5_______6
Recipent____a_______b______c________d_________e______

Possible recombination ABCDE, aBCDE, Abcde, etc

Phenotype: doesn't need any compound, need compound a, need compound bcde, etc

Since all your plate have three amino acid added, you only have to look at recombination that exclude 3 genes / fix two genes.
 
Last edited:

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