Surface Fluorination/Hydroxyl Group

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Discussion Overview

The discussion centers on the interpretation of chemical notation related to surface species, specifically the representations \equiv\text{Ti}-\text{OH} and \equiv\text{Ti}-\text{F} in the context of titanium and silicon compounds. Participants explore the meaning of "surface groups," the implications of bond notation, and the concept of ligand exchange, while addressing their limited familiarity with chemistry and bond representations.

Discussion Character

  • Exploratory
  • Technical explanation
  • Conceptual clarification
  • Debate/contested

Main Points Raised

  • Some participants express uncertainty about the meaning of the notation \equiv\text{Ti}-\text{OH} and \equiv\text{Ti}-\text{F}, suggesting it indicates surface species rather than a triple bond.
  • Others argue that the notation must have a specific meaning, as it is used consistently across different papers.
  • A participant mentions that the notation does not imply a particular model of bonding and that the three lines may indicate the bulk rather than a triple bond.
  • There is a discussion about the representation of silanol groups and how the three lines relate to bonding in silicon compounds.
  • Some participants question the established nature of the notation and seek clarification on its usage in the literature.

Areas of Agreement / Disagreement

Participants do not reach a consensus on the interpretation of the notation or its implications for bonding. Multiple competing views remain regarding the meaning of the three lines and their significance in representing surface species.

Contextual Notes

Participants express limitations in their understanding of chemistry and bond notation, which may affect their interpretations. The discussion includes references to specific papers and examples, but there is no resolution on the notation's established status.

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I'm a condensed matter student with limited knowledge of chemistry or bond notation. In the attached paper, I'm trying to understand what is meant by
\equiv\text{Ti}-\text{OH}
and
\equiv\text{Ti}-\text{F}
All I've been able to gather is that these represent "surface groups", although I'm not sure what is meant by "groups" in this context. I'm pretty new to bond notation, but I'm reasonably sure that the three horizontal lines represent a triple bond, but I'm not sure how I should interpret this in the context of surface species.

Finally, I know what a ligand is in the context of crystal field theory/coordination complexes, but I don't know what is meant by a "simple ligand exchange" that allows us to go from the first equation to the second. What does this mean and how exactly does this occur?

Any explanation/interpretation would be appreciated. No explanation is oversimplified, because this is all Greek to me at this point.
 
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To quote the paper:

[The notation “\equiv\text{Ti}-\text{F}” represents surface species throughout the text.]

My understanding is it doesn't mean triple bond per se, just the Ti atom on the surface, bonded to the rest of the material in an unspecified way.
 
Borek said:
My understanding is it doesn't mean triple bond per se, just the Ti atom on the surface, bonded to the rest of the material in an unspecified way.

But the notation has to mean something, right? I wouldn't think they'd choose that notation arbitrarily. I've attached another paper on Si that uses the same thing, with

\equiv\text{Si}-\text{O}^-
 
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Which can only mean it is an established way of representing a surface atom. Note that in the second paper (Fig. 7) Si is not connected to other atoms in the crystal by the triple bond, it is connected mostly to oxygen atoms.
 
Borek said:
Which can only mean it is an established way of representing a surface atom. Note that in the second paper (Fig. 7) Si is not connected to other atoms in the crystal by the triple bond, it is connected mostly to oxygen atoms.

Yeah, that may well be true. One thing that they mention is silanol. Not that I have any familiarity with this, but here

http://hplc.chem.shu.edu/NEW/HPLC_Book/Adsorbents/ads_chem.html

you can see for "free silanol" that it appears (unless I'm wrong) to have three open bonds. I'm just not sure about this, because I can't find anything in literature about notation for surface groups using that "triple bond" notation. You may be correct.
 
Three bonds and triple bonds are different things. In siloxane bonds on the same image Si has three bonds going left as well, it is just a matter of where you "cut" them for the image.

I am going to delete attached papers for a copyright reasons.
 
Borek said:
Three bonds and triple bonds are different things. In siloxane bonds on the same image Si has three bonds going left as well, it is just a matter of where you "cut" them for the image.

Very true, but don't three (horizontal) lines imply a triple bond?

http://en.m.wikipedia.org/wiki/Triple_bond

Do you know what the notation used in the papers refers to?

Borek said:
I am going to delete attached papers for a copyright reasons.

Sorry, I wasn't sure about the protocol.
 
The three bonds for the silanol example mean that there are three bonds to other silicon atoms in the case of silicon metal. If the articles discussed surface silanols on glass or fused silica, the three lines represent three Si-O-Si bonds to the bulk of the solid glass. Same for the titanium example.
 
chemisttree said:
The three bonds for the silanol example mean that there are three bonds to other silicon atoms in the case of silicon metal. If the articles discussed surface silanols on glass or fused silica, the three lines represent three Si-O-Si bonds to the bulk of the solid glass. Same for the titanium example.

Here is a link to both examples:

http://pubs.acs.org/doi/abs/10.1021/jp036735i (TiO2)

http://www.sciencedirect.com/science/article/pii/S0142961203006835 (Si-O-/Si-OH)

In the TiO2 example, the surface is OH or F terminated, with the Ti coordinated to five O ions. So it might be written as \text{Ti}_\text{5c}-\text{F}

An article in Nature that shows this specific case a bit more clearly can be found at

http://www.nature.com/nature/journal/v453/n7195/full/nature06964.html

What is the significance of the three lines in this case?
 
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  • #10
I can't access the Nature article.
 
  • #11
The indicate that the adsorbed species (F, OH) are situated above a Ti atom *surface site* on the TiO2 substrate. The three lines indicate the bulk, and do not imply a particular model of bonding.
 
  • #12
chemisttree said:
I can't access the Nature article.

Unfortunately, I don't think allowed to post it here.
 
  • #13
gadong said:
The indicate that the adsorbed species (F, OH) are situated above a Ti atom *surface site* on the TiO2 substrate. The three lines indicate the bulk, and do not imply a particular model of bonding.

Have you seen this before? I'm trying to understand if this is an established notation.
 

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