Have you ever compared the mathematical description of a standing wave on e.g. a vibrating string with the mathematical description of a hydrogen orbital?
A standing wave (as opposed to a traveling wave) on a vibrating string can be described by an equation of the form ##y(x,t) = f(x)g(t)## e.g. ##y(x,t) = \cos(kx)\cos(\omega t)##.
##f(x)## gives the overall "envelope" or "shape" of the wave, which does not change with time. ##g(t)## gives an oscillating time-dependence which is the same for every point on the wave. The amplitude of the oscillation at each point x is ##f(x)##. The oscillations at all points are in step ("in phase") with each other.
[If you're not already acquainted with the above, I suggest you study standing waves in classical mechanics.]
The wave function for a single hydrogen orbital with quantum numbers n,l,m is ##\Psi_{nlm}(r,\theta,\phi,t) = \psi_{nlm}(r,\theta,\phi) e^{-i(E_n/\hbar)t}##.
##\psi_{nlm}(r,\theta,\phi)## gives the overall "envelope" or "shape" of the orbital, which does not change with time, and is analogous to ##f(x)## in the standing wave above. ##e^{-i(E_n/\hbar)t} = \cos[(E_n/\hbar)t] + i \sin[(E_n/\hbar)t]## gives an oscillating time-dependence which is the same for every point of the orbital. The amplitude of the oscillation at each point ##r,\theta,\phi## is ##\psi_{nlm}(r,\theta,\phi)##. The oscillations at all points are in step ("in phase") with each other.
This description is completely analogous with a standing wave on a string, except for the number of spatial dimensions and the use of complex numbers in the time-dependent part.
You can find tables of ##\psi_{nlm}## for different sets of quantum numbers, in many textbooks and on many web pages, e.g. here:
http://hyperphysics.phy-astr.gsu.edu/hbase/quantum/hydwf.html
So e.g. for the ground state (n,l,m = 1,0,0) we have $$\Psi_{100}(r,\theta,\phi) = \frac{1}{\sqrt{\pi} a_0^{3/2}} e^{-r/a_0} e^{-i(E_0/\hbar)t}$$ where ##a_0## is the Bohr radius and ##E_0## is the ground-state energy of hydrogen.
The pictures that you see in textbooks (like the ones you showed above) are an attempt to show the "shapes" of the probability distributions ##\left| \Psi_{nlm}(r,\theta,\phi,t) \right|^2 = \left| \psi_{nlm}(r,\theta,\phi) \right|^2##. They are analogous to pictures of the "envelope" of a standing wave on a string. To be complete, they should include some kind of "shading" or "fuzziness" to indicate the variations in probabilty density with position.
There are no smaller waves "hidden" inside these diagrams, as you attempted to draw in one of your diagrams. ##\Psi## at all points in an orbital oscillates together, in step with each other, according to the position-independent time dependence ##e^{-i(E_0/\hbar)t}##.