How Do DNA and RNA Polymerase Function and Differ in Error Rates?

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SUMMARY

DNA and RNA polymerases function by reading the template strand and incorporating complementary nucleotides based on geometric recognition of base pairs. DNA polymerase exhibits lower error rates compared to RNA polymerase due to its 3'->5' endonuclease activity, which enables proofreading and correction of mistakes. This proofreading domain is crucial for maintaining fidelity during DNA replication, while RNA polymerase lacks this capability, resulting in higher error rates.

PREREQUISITES
  • Understanding of enzyme mechanisms in molecular biology
  • Knowledge of nucleotide structure and base pairing
  • Familiarity with DNA replication processes
  • Basic concepts of proofreading in enzymatic reactions
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  • Research the mechanism of DNA polymerase proofreading in detail
  • Explore the structural differences between DNA and RNA polymerases
  • Learn about the implications of error rates in genetic mutations
  • Investigate the role of other enzymes involved in DNA repair
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Molecular biologists, geneticists, and students studying enzymatic functions and DNA replication processes will benefit from this discussion.

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How do these enzymes "read" the template strand and "put in" the complementary nucleotide?

Also I've heard that DNA polymerase is less error prone than RNA polymerase. How is this accomplished?
 
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The enzymes let nucleotides diffuse into the active site and bind to the template strand. The enzymes are able to sense when the correct nucleotide has bound to the template by the geometry of the newly formed base pair. Once the enzyme has sensed that the correct nucleotide is bound, it can close its fingers domain, causing the active site to form and catalysis to occur.

DNA polymerase is less error prone in part because it has a 3'->5' endonuclease ability that allows it to remove mistakes (this occurs at the proofreading domain of the DNA polymerase).
 

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