Molecular structure and analysis method

In summary, the primary psychoactive constituent of marijuana is \Delta9-Tetrahydrocannabinol (THC). Its metabolites include 11-hydroxy- \Delta9-THC (11-OH-THC) and 11-nor-9-carboxy- \Delta9-THC (THC-COOH). The molecular structures of these compounds were provided and explained, with the notation of 'nor' indicating a replacement at the 9 position and '\Delta' indicating the location of unsaturation. An analytical method for determining ng/mL levels of these compounds in urine samples was discussed, including sample preparation, instrumentation, and calibration methods. It was explained that derivatization is often used to
  • #1
~christina~
Gold Member
714
0

Homework Statement


[tex]\Delta[/tex]9-Tetrahydrocannabinol (THC) is the primary psychoactive constituent of marijuana. Its metabolites include 11-hydroxy- [tex]\Delta[/tex]9-THC (11-OH-THC) and 11-nor-9-carboxy- [tex]\Delta[/tex]9-THC (THC-COOH).

1)Write down the molecular structure of these three compounds.
2)Develop an analytical method to determine ng/mL levels of THC, 11-OH-THC and THC-COOH in urine samples, which include:
a)step-by-step sample preparation
b)instrumentation
c)calibration method
Please provide your reasoning for choosing a specific method or instrument.

Homework Equations



The Attempt at a Solution


Well, I looked up the structure of THC, but as for the notation used for the description of the structure, I'm not sure what they all mean. It's been awhile since I took organic...
Anyway, for the structures, Is it correct to say that it's the ones I found in the links?

1) THC structure: http://en.wikipedia.org/wiki/Tetrahydrocannabinol"
11-hydroxy- [tex]\Delta[/tex]9-THC (11-OH-THC) : http://en.wikipedia.org/wiki/11-Hydroxy-THC
11-nor-9-carboxy- [tex]\Delta[/tex]9-THC (THC-COOH) : http://en.wikipedia.org/wiki/11-nor-9-Carboxy-THC"

What does the, "nor" and the [tex]\Delta[/tex] stand for in the notations?

2) I guess I can look up the steps and such, but with calibration, how would that work?
Would there be an external standard for the instrument (LC-MS or other instrument)

In addition I hear about derivatization of samples prior to analysis for this in some papers. What is derivatization and why is it needed here?


Thank you and the last question I bolded is something I need help on.
 
Last edited by a moderator:
Physics news on Phys.org
  • #2
~christina~ said:
What does the, "nor" and the [tex]\Delta[/tex] stand for in the notations?

The 'nor' means that something has been removed and replaced with something. The root structure of these compounds is 'cannibinol'. You will notice that cannibinol has a methyl group at the 9 position. In this case the '11-nor-9-carboxy tetrahydrocannibinol' means that which has been replaced at the 9 position (methyl in this case or 'nor-9') is now a 'carboxy' (nor-9-carboxy').

Tetrahydrocannibinol has 4 hydrogens added to cannibinol leaving one double bond at the 'delta 9' position. The 'delta' nomenclature indicates which C-C bond has the unsaturation. I have seen this used in unsaturated fatty acids. For example, oleic acid is referred to as the http://en.wikipedia.org/wiki/Fatty_acid"

In addition I hear about derivatization of samples prior to analysis for this in some papers. What is derivatization and why is it needed here? [/B]

Thank you and the last question I bolded is something I need help on.

Derivatization is used to aid in the identification of a compound. In some cases, detection by UV is not possible because the compound doesn't have a UV chromophore. In that case it is useful to 'derivatize' or add something that has a UV chromophore to the base structure to aid in its visualization using UV light. A benzyl ester would be a useful derivative for a carboxylic acid that otherwise has no chromophore at long enough UV wavelength, for example. In other cases, derivatization is used to make a compound more mobile on a gas chromatograph or HPLC. Sometimes alcohols, especially polyols are derivatized with the trimethylsilyl group to make them easier to chromatograph. Carboxylic groups are notoriously difficult to elute with a good peak shape and in a reasonably short time. They are often converted into their methyl esters prior to analysis.
 
Last edited by a moderator:
  • #3
chemisttree said:
The 'nor' means that something has been removed and replaced with something. The root structure of these compounds is 'cannibinol'. You will notice that cannibinol has a methyl group at the 9 position. In this case the '11-nor-9-carboxy tetrahydrocannibinol' means that which has been replaced at the 9 position (methyl in this case or 'nor-9') is now a 'carboxy' (nor-9-carboxy').

Tetrahydrocannibinol has 4 hydrogens added to cannibinol leaving one double bond at the 'delta 9' position. The 'delta' nomenclature indicates which C-C bond has the unsaturation. I have seen this used in unsaturated fatty acids. For example, oleic acid is referred to as the http://en.wikipedia.org/wiki/Fatty_acid"

I understand now, but it confuses me because based on what you said, the compounds structure I think is correct, but after each compound why is there is the...simplified formula? in brackets? [ex. 11-hydroxy- 9-THC (11-OH-THC) ] Is it there just for reference purposes? (It reminds me of something like Ca(NO3)2)

Derivatization is used to aid in the identification of a compound. In some cases, detection by UV is not possible because the compound doesn't have a UV chromophore. In that case it is useful to 'derivatize' or add something that has a UV chromophore to the base structure to aid in its visualization using UV light. A benzyl ester would be a useful derivative for a carboxylic acid that otherwise has no chromophore at long enough UV wavelength, for example. In other cases, derivatization is used to make a compound more mobile on a gas chromatograph or HPLC. Sometimes alcohols, especially polyols are derivatized with the trimethylsilyl group to make them easier to chromatograph. Carboxylic groups are notoriously difficult to elute with a good peak shape and in a reasonably short time. They are often converted into their methyl esters prior to analysis.

Ah, okay. I understand why derivatization is needed with some compounds.
 
Last edited by a moderator:
  • #4
~christina~ said:
I understand now, but it confuses me because based on what you said, the compounds structure I think is correct, but after each compound why is there is the...simplified formula? in brackets? [ex. 11-hydroxy- 9-THC (11-OH-THC) ] Is it there just for reference purposes? (It reminds me of something like Ca(NO3)2)

Yes, it is an ad hoc abbreviation.
 
  • #5
chemisttree said:
Yes, it is an ad hoc abbreviation.

Thanks for your help,
chemisttree :smile:
 

What is molecular structure?

Molecular structure refers to the arrangement and bonding of atoms within a molecule. It determines the physical and chemical properties of a substance.

What are the different types of molecular structures?

The three main types of molecular structures are: 1. Linear - all atoms are in a straight line2. Bent or angular - atoms are arranged in a V-shape3. Tetrahedral - atoms are arranged in a pyramid shape with four bonding groups.

What is the importance of molecular structure?

The molecular structure of a substance affects its properties such as melting and boiling points, solubility, and reactivity. It also determines how the molecule will interact with other molecules, which is essential for understanding chemical reactions.

What are some common methods used for molecular structure analysis?

Some common methods for molecular structure analysis include X-ray crystallography, nuclear magnetic resonance (NMR) spectroscopy, and mass spectrometry. These techniques allow scientists to determine the arrangement of atoms and bonds within a molecule.

How can molecular structure analysis be applied in different fields?

Molecular structure analysis has applications in various fields such as pharmaceuticals, materials science, environmental science, and forensics. It is used to identify unknown substances, design new drugs, and understand the properties of materials.

Similar threads

  • Biology and Medical
Replies
4
Views
3K
  • Biology and Medical
Replies
1
Views
1K
  • Set Theory, Logic, Probability, Statistics
Replies
4
Views
1K
  • Biology and Medical
Replies
4
Views
4K
  • Biology and Medical
Replies
4
Views
7K
  • Programming and Computer Science
Replies
29
Views
3K
  • Set Theory, Logic, Probability, Statistics
Replies
1
Views
1K
  • Programming and Computer Science
Replies
4
Views
2K
Replies
10
Views
7K
  • Set Theory, Logic, Probability, Statistics
Replies
1
Views
2K
Back
Top