What is the configuration (R or S) of these molecules?

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SUMMARY

The discussion centers on the configuration of two molecules, specifically identifying their stereochemistry as R and S. Participants clarify that the first molecule is R due to the correct prioritization of functional groups, while the second is S, with emphasis on the importance of recognizing all substituents around the stereocenter. A common mistake noted was misassigning priority to COOH over NH2 in the first molecule and overlooking the influence of additional carbon atoms in determining the configuration.

PREREQUISITES
  • Understanding of stereochemistry and the Cahn-Ingold-Prelog priority rules
  • Familiarity with molecular structures and functional groups, specifically COOH and NH2
  • Knowledge of how to identify stereocenters in organic molecules
  • Ability to visualize and redraw molecular structures for clarity
NEXT STEPS
  • Study the Cahn-Ingold-Prelog rules for assigning R and S configurations
  • Learn to identify and prioritize functional groups in organic chemistry
  • Practice drawing and analyzing stereoisomers using molecular models
  • Explore common mistakes in stereochemistry to avoid misassignments
USEFUL FOR

Chemistry students, organic chemists, and anyone involved in molecular configuration analysis will benefit from this discussion.

sd34
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TL;DR
Hi. Can someone tell me which molecule is R or S?

For me, the first one is S and the second one is R.
244942
 

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I think the first is R and the second is S.

Can you explain how you arrived at your answers?
 
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mjc123 said:
I think the first is R and the second is S.

Can you explain how you arrived at your answers?

Yes, it’s correct.

Basically the mistake I made was that I gave the first priority to COOH instead of NH2 in the first molecule, whereas in the second one I forgot to switch from R to S.
 
Okay, I have another doubt.

Why the carbon on the right is S and not R?

Aren’t the priorities like this?
 

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You've forgotten the other C atom on the C 2 atoms from the stereocentre on the chain you labelled 2.
 
mjc123 said:
You've forgotten the other C atom on the C 2 atoms from the stereocentre on the chain you labelled 2.

Okay, but isn’t the priority still the same?
 
No, that C trumps the H on C2 on the other chain.
 
mjc123 said:
No, that C trumps the H on C2 on the other chain.

If it’s not too much of a trouble, could you redraw the molecule?
 
molecule.png
 
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mjc123 said:

Thanks a lot! So basically I switched no.1 and no.2 in terms of priority.
 

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