In physics, depending on the problem, it is much better to use rectangular coordinates in some problems, polar coordinates in others.
For instance, if you open up most college level physics, the first few chapters are mostly problems done in rectangular coordinates (though sometimes polar is a natural way to describe a physical setup, but often the math is better done in rectangular coordinates). Then maybe halfway through the course, they introduce rotational problems. We usually treat applications in rectangular or polar depending on the physical setup, and the biggest reason is it makes it much more straightforward to solve these equations in the coordinates that fit with the situation.