Explaining the Source Code for Calculating Stationary Distribution in R

[user366312]

TL;DR

Kindly explain the source code in R which meant for calculating stationary distribution of a transition matrix.

Summary: Kindly explain the source code in R which meant for calculating stationary distribution of a transition matrix.

I am trying to understand the following source code meant for finding stationary distribution of a matrix:

[CODE title="R code" highlight="5"]$# Stationary distribution of discrete-time Markov chain$# (uses eigenvectors)
stationary <- function(mat)
{
x = eigen(t(mat))$vectors[,1]
as.double(x/sum(x))
}[/CODE]

I tested the following source code myself:

[CODE title="R code" highlight="6,16"]> rm(list=ls())
>
> P <- matrix(c(0.66, 0.34,
+ 0.66, 0.34), nrow=2, ncol=2, byrow = TRUE)
>
> x <- eigen(t(P))
> x
$values
[1] 1 0

$vectors
[,1] [,2]
[1,] 0.8889746 -0.7071068
[2,] 0.4579566 0.7071068

> y <- x$vectors[,1]
> y
[1] 0.8889746 0.4579566
> [/CODE]

looks like the command

y <- x$vectors[,1]

is selecting the 1st column of the matrix.

Why wasn't that simply written like the following?

[CODE title="R code"]
$# Stationary distribution of discrete-time Markov chain$# (uses eigenvectors)
stationary <- function(mat)
{
x = eigen(t(mat))
y = x[,1]
as.double(y/sum(y))
}
[/CODE]

What was the reason for introduction of a dollar sign and vector keyword?

 

[jedishrfu]

My suggestion is to begin reading up on R or checking out some online tutorials

https://www.tutorialspoint.com/r/index.htm
@FactChecker suggestion in your other thread is a great technique for teasing out what these constructs mean.

There’s also the Rosetta Code website with examples of R doing various tasks. The code may or may not be the best implementation of any task but they are instructive

http://rosettacode.org/wiki/Category:R
And lastly the R reference on the eig function

https://www.rdocumentation.org/packages/pracma/versions/1.9.9/topics/eig

 

[FactChecker]

What was the reason for introduction of a dollar sign and vector keyword?

That is what the documentation of the eigen function says that it returns. (see R documentation of eigen function)
I don't think that your code will work. When you encounter an unfamiliar function, it is always good to check the documentation.

 

[user366312]

That is what the documentation of the eigen function says that it returns. (see R documentation of eigen function)
I don't think that your code will work. When you encounter an unfamiliar function, it is always good to check the documentation.

Got it thanks.