A How does DFT handle degenerate eigenvectors?

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Density Functional Theory (DFT) addresses degenerate eigenstates by recognizing that any linear combination of degenerate states remains a valid solution to the Kohn-Sham equations, which can complicate the definition of electron density. Each degenerate state contributes its own density, leading to the challenge of defining a unique electron density when states are degenerate. In cases of rotational degeneracy, such as p orbitals, the orientation of the orbital can vary, affecting the directionality of the electron density. DFT typically employs constraints or symmetry considerations to select a specific orientation for degenerate states, ensuring a well-defined electron density. Overall, DFT manages degeneracy through careful treatment of the contributing states and their densities.
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DFT and degeneracy
I have a question about how DFT (density functional theory) handles degenerate states. The Hamiltonian in DFT is a functional of the electron density defined via ##n(\mathbf{r})=\sum^N_{k=1}|\psi_k(\mathbf{r})|^2##. However, say I have a pair of degenerate states. Then any linear combination of these two states is also a solution to the Kohn-Sham equations and the electron density based on the above definition seems to be not well defined. How does DFT address this? Is there a constraint for degenerate states which picks a proper orientation?
 
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Hm, each of the degenerate states has it's own density. E.g. if degeneracy is due to rotational degeneracy, as an example, psi might be a p orbital. As they are degenerate, the orbital can point in any direction and the corresponding electronic density will be concentrated along the same direction.
 
I have this hamiltonian whose eigenvalues I wanna find. If you are curious it's equation 12 in this paper I've attached a pdf showing what I did, really all that matters is the very end, the last matrix and equations 19 and 20, but in case a summary would be useful: 1.- Get the fourier transform 2.- Expand on sigma, group things that multiply the same pairs of operators 3.- Expand on k, use anticommutation to get the right order of the operators (I know the spinors I'm using aren't...