Protein Synthesis: Is it a Vicious Circle?

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    Protein Synthesis
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Discussion Overview

The discussion centers around the concept of protein synthesis and whether it can be considered a "vicious circle." Participants explore the processes of protein consumption, amino acid conversion, and the synthesis of proteins from amino acids, questioning the appropriateness of the term "vicious circle" in this biological context.

Discussion Character

  • Debate/contested
  • Conceptual clarification

Main Points Raised

  • Some participants assert that when proteins are consumed, they are converted to amino acids, which are then used to synthesize proteins, suggesting a cyclical process.
  • Others challenge the characterization of this process as a "vicious circle," arguing that it does not fit the definition of a sequence that worsens a situation.
  • A participant proposes that the process could be viewed as a form of recycling rather than a vicious cycle, emphasizing the pragmatic nature of the conversion.
  • Another participant introduces the term "futile cycle," explaining that in biology, this refers to a situation where a molecule is synthesized and then broken down, and notes that such cycles can have regulatory roles in biological processes.
  • Discussion includes examples of regulatory mechanisms in protein synthesis, such as phosphorylation and ubiquitination, which illustrate the complexity of these processes.

Areas of Agreement / Disagreement

Participants do not reach a consensus on whether the term "vicious circle" is appropriate for describing protein synthesis. Multiple competing views remain regarding the characterization of the process.

Contextual Notes

Participants express differing interpretations of the term "vicious circle" and its applicability to biological processes, highlighting the complexity of metabolic pathways and regulatory mechanisms without resolving these interpretations.

avito009
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Is Protein Synthesis a vicious circle?

When we take proteins they are converted to amino acids. But during protein synthesis amino acids are converted to proteins. Is this correct and in a sense its a vicious circle.
 
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What do you mean by "When we take proteins they are converted to amino acids."?

Protein synthesis does not convert proteins to amino acids.
 
I mean when we eat foods that contain protein, that protein gets converted to amino acids. And during protein synthesis amino acids get converted to proteins. So isn't that a vicious circle. Protein gets converted to protein.
 
No it isn't, I don't think the term means what you think it means:

vi·cious cir·cle

noun

1. A sequence of reciprocal cause and effect in which two or more elements intensify and aggravate each other, leading inexorably to a worsening of the situation.

synonyms: dilemma, vicious cycle, downward spiral, vortex, no-win situation, catch-22, chicken-and-egg situation

"but if I bring Mr. Raines the foods he asks for, he blames me for not serving healthier meals—it's a vicious circle"

Having to ingest more proteins to replace those used is just another example of metabolism.
 
avito009 said:
I mean when we eat foods that contain protein, that protein gets converted to amino acids. And during protein synthesis amino acids get converted to proteins.

Yes.

avito009 said:
So isn't that a vicious circle.

In science, you can call things anything you want like F=ma is the same as G=pq, but I agree with Ryan_m_b that this is an unusual use of "vicious circle".
 
avito009 said:
When we take proteins they are converted to amino acids. But during protein synthesis amino acids are converted to proteins. Is this correct and in a sense its a vicious circle.

Why not just consider it a form of recycling? You're disassembling a structure of elements in one form and re-assembling them in a different form that may be more useful. You wouldn't consider that cycle "vicious" would you. I would say it's more pragmatic than vicious.
 
The term that is more often used in biology is a "futile cycle" – the situation where a molecule is synthesized by one metabolic pathway only to be broken down into its components by another pathway. Very often, biology has evolved mechanisms to avoid futile cycling, for example, the signaling pathways that prevent glycolysis (which breaks down glucose) and gluconeogenesis (which synthesizes glucose), from occurring at the same time.

Sometimes futile cycling, however, has important regulatory roles. For example, the phosphorylation of proteins is an important regulatory mechanism for turning many biological processes on or off. Protein kinases will attach phosphate groups to proteins while phosphatases will remove these phosphate groups. The constant cycling between phosphorylated and unphosphorylated states mediated by the kinases and phosphatases is a very rapid and dynamic process, allowing the cell to rapidly change the phosphorylation state of its target proteins by altering the balance of activity between specific kinases and phosphatases.

Similar regulation sometimes occurs in protein synthesis, most notably for many proteins involved in the cell cycle. These proteins can be targeted for degradation by the attachment of a ubiquitin tag, and this degradation is important for regulating the levels of these proteins in the cell.
 
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