What Are Introns? Understanding Their Role in Gene Expression

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Discussion Overview

The discussion centers on the role and characteristics of introns in gene expression, exploring their relationship to exons and the overall structure of genes within the genome. Participants examine the proportion of introns relative to exons and the implications of their presence in the genetic material.

Discussion Character

  • Exploratory
  • Technical explanation
  • Conceptual clarification

Main Points Raised

  • Some participants clarify that the 2% figure for protein-coding genes refers only to exons, which are the segments that encode proteins.
  • There is a proposal that introns occupy significantly more space in the genome compared to exons, with one participant suggesting that introns hold 13 times more nucleotide space than exons based on a 26% to 2% comparison.
  • One participant provides a diagram of the GAPDH gene to illustrate the relative sizes of exons and introns, noting that much of the gene consists of non-coding intronic sequences.
  • Participants express a sense of complexity and curiosity regarding the structure and function of introns, indicating that the topic is not straightforward.

Areas of Agreement / Disagreement

Participants generally agree on the distinction between introns and exons, as well as the relative proportions of each in the genome. However, there is some uncertainty regarding the implications of these proportions and the complexity of intron functions, leaving aspects of the discussion unresolved.

Contextual Notes

The discussion does not resolve the broader implications of introns in gene expression or their evolutionary significance, and participants do not fully explore the functional roles of introns beyond their structural presence.

Eagle9
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Good day! :oldsmile:

I have read this interesting blog:
https://thehumanevolutionblog.com/2...ourney-through-the-dark-matter-of-the-genome/
There is explained what are introns (of course I knew the meaning of this term but I intentionally copied the following explanation from this blog):
Introns – the regions within a gene that do not encode for part of the protein and are instead “spliced out” of the mRNA before it is translated to protein.
Image from Wikipedia:
YASuUjD.png

So, introns are part of mRNA, or gene(s) itself located in DNA, this is clear. The genes make up only 2-3 % of the whole DNA, so introns (or their predecessors) are located in this 2-3 %, right?
But this blog has got such image:
cuLLDDZ.jpg

What do they mean? 26 % of whole genome belongs to the introns that (if I understood correctly) are part of 2-3 % of the same whole genome? Or maybe I misunderstood something? :oldeyes:
 

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The 2% protein-coding genes refers only to the exons in genes (as only exons code for protein).
 
Ygggdrasil said:
The 2% protein-coding genes refers only to the exons in genes
So, the introns hold 13 times (26/2=13) more space (I mean nucleotide numbers in DNA) than exons? :oldeyes:
 
Eagle9 said:
So, the introns hold 13 times (26/2=13) more space (I mean nucleotide numbers in DNA) than exons? :oldeyes:
Yup, that is correct. For example, here's a diagram showing the exons (thick bars) and introns (thin bars) for the various splicing variants of a fairly typical gene, GAPDH (encoding the glycolytic enzyme, glyceradehyde-3-phosphate dehydrogenase):
Capture.PNG

https://www.ncbi.nlm.nih.gov/gene/2597

As you can see, there is much more intronic, non-coding sequence in the gene than exonic, protein-coding sequence. Furthermore, of the exons, only the parts colored in dark green actually code for protein. The exonic regions in light green at the beginning and end of the transcripts encode the 5' and 3' untranslated regions of the mRNA, which do not get translated into protein.

Weird, right?
 

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Ygggdrasil said:
Yup, that is correct. For example, here's a diagram showing the exons (thick bars) and introns (thin bars) for the various splicing variants of a fairly typical gene, GAPDH (encoding the glycolytic enzyme, glyceradehyde-3-phosphate dehydrogenase):
capture-png.png

https://www.ncbi.nlm.nih.gov/gene/2597

As you can see, there is much more intronic, non-coding sequence in the gene than exonic, protein-coding sequence. Furthermore, of the exons, only the parts colored in dark green actually code for protein. The exonic regions in light green at the beginning and end of the transcripts encode the 5' and 3' untranslated regions of the mRNA, which do not get translated into protein.
Thanks a lot :oldsmile:

Ygggdrasil said:
Weird, right?
Yes, weird and complex :oldeyes:
 

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