For a list of the incompatibilities between the General Theory of Relativity and Quantum Mechanics see Dr. Mendel Sach's website http://www.compukol.com/mendel/ or his book "Einstein vs. Bohr".
List on website:
A) Principle of complementarity, implying 'pluralism', versus principle of relativity, implying 'monism'.
B) Atomism, elementarity and seperability of particles of matter and a model in terms of an 'open system', versus the continuous field concept and a model in terms of a 'closed system' at the outset, i.e. the basic inseparability of material components from a system of matter.
C) In our approach to what it is that we truly 'know', we have the conflict of logical positivism versus realism--the former asserting that all we can possibly know is what we can verify directly in measurements; the latter asserting that there is a real world, independent of whatever we do to find out about it, and that indeed we may learn things about the world that are not directly verifiable in measurements, though they are inferable from the logical structure of our theories, if they also predict correct empirical facts.
D) Irreducible subjectivity in the role of measuring apparatus as a fundamental ingredient in our understanding of matter versus full objectivity, in which the 'subject' and the 'object' of an interacting system are truly interchangeable without losing the objective truth of the entire closed system.
E) Indeterminism (all variables of matter are not 'predetermined') versus determinism (all variables of matter are predetermined).
F) Linear mathematics versus nonlinear mathematics.
G) A fundamental role in the laws of nature of probabilities and their calculus, versus the role of probabilities only as a tool for the observer, but playing no fundamental role in the laws of nature.
H) Special reference frame of the measuring apparatus versus no special frame of reference for any component of a closed system, whether or not one of these components is a large macroobserver and another a small bit of micromatter.