Creating Protein Prep Solutions: What Ingredients Do You Need?

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SUMMARY

This discussion focuses on creating protein preparation solutions, specifically detailing the ingredients required: 1 mM tributylphosphine, 1% SDS, and 10 M urea. The preparation involves calculating the necessary weights for these concentrations, with SDS typically measured as grams per 100 mL of solution. It is emphasized that SDS and urea can be dissolved in distilled deionized water, while tributylphosphine is often stored in N-methyl-2-pyrrolidine. For accurate preparation, consulting the manufacturer's spec sheet for solubility information is crucial.

PREREQUISITES
  • Understanding of molarity and weight/volume (w/v) calculations
  • Familiarity with protein chemistry and solution preparation
  • Knowledge of chemical solubility and solvent selection
  • Experience with laboratory safety and handling of chemicals
NEXT STEPS
  • Research the preparation of 1 mM tributylphosphine solutions
  • Learn about the properties and applications of SDS in protein chemistry
  • Investigate the use of N-methyl-2-pyrrolidine as a solvent for tributylphosphine
  • Review the specifications and solubility guidelines provided by chemical manufacturers
USEFUL FOR

Researchers in biochemistry, laboratory technicians, and anyone involved in protein preparation and analysis will benefit from this discussion.

sotellme
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I have searched and searched till my eyes fall out, but can not find any recipes for making these solutions. Anyone can help me out?

1mM tributylphosphine
1%SDS
10 M Urea
 
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It mostly a matter of you calculating the weight required for 1 mM solution and a 10 M solution. Urea is solid and Tributylphosphine is usually in liquid. Both should be found in your lab. It is basic chemistry.

As far the SDS solution goes, it is probably w/v but it might be specifiy. So when dealing with percentages in a recipe in term of w/v, it is about an amount of grams per 100 mL of solution. Therefore, it would be 1 g of SDS per 100 mL of solution.
 
hI iAN,

I am thinking of the solvent (?) to dissolve these stuffs. For example for SDS solution, should i use sterile water or buffers?
 
SDS and Urea can be diluted into distilled deionized water. Usually, if a chemical solution requires to be prepare in a buffer, it should be mention in the name of solution.

For tributylphosphine, I am not sure but sigma keeps their 200 mM solution in N-methyl-2-pyrrolidine.
http://www.sigmaaldrich.com/catalog/search/ProductDetail/SIGMA/T7567

You may want to check this reference given by sigma.
Herbert, B., et al., Reduction and alkylation of proteins in preparation of two dimensional map analysis: why, when, and how?. Electrophoresis 22, 2046-57, (2001)
 
Whenever you're in doubt, check the spec sheet that comes with the chemicals for information on solubility. If the chemicals didn't come with a spec sheet and you aren't sure, contact the manufacturer for solubility information.
 
if you are doing protein chemistry you should really use nanopure water.

% sds is almost always w/v
 

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