How to calculate species abundance and diversity

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SUMMARY

This discussion focuses on calculating species abundance and diversity using the Shannon index formula, specifically H'=-Σ(n_i/N)ln(n_i/N). Participants clarify the components of the formula, including species abundance (n_i), total individuals (N), and the importance of summing all terms for accurate results. The conversation emphasizes the need to understand the natural logarithm (ln) and how to apply it to specific species counts, such as ants, grasshoppers, pill bugs, and spiders. The final formula requires summing the contributions of each species to derive the overall diversity index.

PREREQUISITES
  • Understanding of the Shannon index for biodiversity
  • Familiarity with natural logarithms (ln)
  • Basic knowledge of species abundance and richness
  • Ability to perform summation in mathematical formulas
NEXT STEPS
  • Learn how to calculate Shannon diversity index using real data sets
  • Explore the implications of species richness on ecosystem health
  • Study other diversity indices, such as Simpson's index
  • Investigate the role of biodiversity in ecological balance
USEFUL FOR

Ecologists, biologists, environmental scientists, and students studying biodiversity and ecological statistics.

blicker
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Homework Statement


This is the sample population taken along a 5m transect:
ants:9
grasshoppers:1
pill bugs:4
spiders:1


Homework Equations


What formulas would i use to calculate the species abundance and diversity?


The Attempt at a Solution


I only know this formula H'=-\Sigma (n_{}i/N)xIn(n_{}i/N) and i don't know what to do with this formula.
 
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Hi blicker! :smile:

Can it be that your formula is actually:
3799228b95da61aa2eca76e4132f0aa2.png

where "ln" is the natural logarithm (and also a button on your calculator), and where ni is the number of individuals of species i?

See: http://en.wikipedia.org/wiki/Shannon_index
 
yes that's it! but i don't know what numbers go where or how to calculate it. like would i include the sigma symbol and the letters above and below it?
 
The sigma symbol indicates that you have to sum.
So:
H'=-\sum_{i=1}^S {n_i \over N} \ln {n_i \over N} = -({n_1 \over N} \ln {n_1 \over N} + {n_2 \over N} \ln {n_2 \over N} + {n_3 \over N} \ln {n_3 \over N} + {n_4 \over N} \ln {n_4 \over N})

From wiki:
* ni The number of individuals in species i; the abundance of species i.
* S The number of species. Also called species richness.
* N The total number of all individuals
* pi The relative abundance of each species, calculated as the proportion of individuals of a given species to the total number of individuals in the community: n_i\over N
 
so would the equation for ants look like this:
-(9/15)In(9/15)
 
blicker said:
so would the equation for ants look like this:
-(9/15)In(9/15)

Well, Shannon's index specifies to sum all the terms.
So what you mention is only part of H'.

Btw, it is ln ("logarithmus naturalis").But I can't really tell you what your problem asks.
I'm not studying whatever science you're studying - I'm a mathematician.

I did find this article about diversity: http://en.wikipedia.org/wiki/Diversity_Index
And apparently n_i is the "species abundance".
Furthermore p_i={n_i \over N} is the "relative species abundance".
 
well thanks for your help anyway.
 

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