RNA coding sequence for proteins

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The discussion focuses on the coding sequences of RNA and DNA, emphasizing that the directionality of nucleotide sequences is crucial for protein synthesis. It highlights that DNA and RNA have distinct nucleotides, with RNA using uracil instead of thymine. The importance of start and stop codons is noted, as they dictate the reading frame for translating genetic information into proteins. Additionally, it addresses the potential for certain nucleotide triplets to function differently when read in reverse, which can lead to non-coding or "dead-end" codons. Understanding these concepts is essential for grasping the complexities of genetic coding and protein synthesis.
Phil Core
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Simplistic Example
Given - DNA - RNA AATGTA codes for a protein.

1. Does the inverse ATGTAA usually/ever code for a protein?
2. Does the reciprocal RNA TTACAT usually/ever code for a protein?
 
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RNA does not have "T", it has uracil, "U". ACTG are the nucleotides for DNA, "ACUG" for RNA
DNA overall has a "start end, 5 prime" and a "finish end, 3 prime". Groups of three nucleotides are called codons, like in your example.

There are start codons and stop codons. So the direction of the nucleotide sequence to interpret has a specific direction to it for a protein or polypeptide.

For example: DNA copying (replication)
DNA polymerase adds nucleotides to the deoxyribose (3') ended strand in a 5' to 3' direction. Lagging strand is synthesised in fragments. Nucleotides cannot be added to the phosphate (5') end because DNA polymerase can only add DNA nucleotides in a 5' to 3' direction. So a given set of codons has direction to it dictated overall by 5 prime- 3 prime, and stop and start codons.

So your question needs a tune up. There is direction, plus codons for stop and start.

A very misleading answer to the question as asked is yes. This ignores some combinations of nucleotide triplets could be a codon when "read forwards" and something else when "read backwards", may be a so-called dead end codon. Other names for these "garbage" triplets are termination codon or nonsense codon. I like "dead-end" for teaching.
 
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Likes BillTre and Phil Core
Sorry I can not even get the basics correct. You are a good man Jim and I appreciate your answer. You made things a lot clearer for me.
 

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