The request for an explanation is a good one.
If you take for granted that all possible clocks will be identically time dilated, then using the light clock as your generic clock in all subsequent though experiments is fine.
But all must admit that light is a very special entity with extraordinary properties, and if you are attempting to verify the universality of clock dilation in your own thinking before moving to just take it for granted, it makes sense to wonder what would be the effect on the actions of a mechanical clock - something with size and mass. It makes sense to wonder that different orientations of the oscillating and rotating parts of the clock might change their lengths and radii in one dimension, and therefore effect centers of mass, centers of rotation, and thereby effect linear and angular accelerations, etc.
This is not just "physical processes slowing down"... there are gross mechanical effects to account for, as well as smaller things in chemistry like molecular bonds, orbitals, and even smaller things, etc.
Surely someone has done this analysis and demonstrated that all these effects must balance out so that the mechanical clock may be replaced with the simple light clock without reservation?