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ArjenDijksman said:The amplitudes should be seen in this way as relative weights. You need of course to normalize them to retrieve a probability distribution.
No that won't wash. If they need to be normalized then normalize them before using them in a joint probability. All the P's in P(ab) = P(a)P(b), are normalized probabilities. Now you can reweigh and counter-weigh the factors but that's not the case for amplitudes. Both scale (by real factors) the same not reciprocally.
It just doesn't work that way.
Amplitudes are (phased) square roots of probabilities. The "why" is in the fact that we (unnecessarily but historically) work with the left and right ideals (spaces on which the operators act) of an operator algebra rather than at the level of the algebra (where the physics is expressed).
If you stick to Hermitian operators for observables and density operators for modes then there is no puzzle about squaring amplitudes. The density operator is the quantum analogue of the classical probability distribution. No squaring, no square-rooting.
Ask first why we take the square root of the operator algebra to get the Hilbert space (ket space) and its dual (bra space). The main answer so far as I can tell is that the math is easier at that level.
Note we can still formulate sharp system modes ("states") via density operators.
We can still formulate the eigen-value principle:
X\rho = x\rho
We can still formulate equations of motion.
We don't even need to invoke the modes when expressing HUP.
Though the historical formulation starts with the Hilbert space the operational sequence (how closely the mathematical objects link to physical actions) starts with the operator algebra.