What is Proteins: Definition and 77 Discussions

Proteins are large biomolecules and macromolecules that are comprised of one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, responding to stimuli, providing structure to cells and organisms, and transporting molecules from one location to another. Proteins differ from one another primarily in their sequence of amino acids, which is dictated by the nucleotide sequence of their genes, and which usually results in protein folding into a specific 3D structure that determines its activity.
A linear chain of amino acid residues is called a polypeptide. A protein contains at least one long polypeptide. Short polypeptides, containing less than 20–30 residues, are rarely considered to be proteins and are commonly called peptides, or sometimes oligopeptides. The individual amino acid residues are bonded together by peptide bonds and adjacent amino acid residues. The sequence of amino acid residues in a protein is defined by the sequence of a gene, which is encoded in the genetic code. In general, the genetic code specifies 20 standard amino acids; but in certain organisms the genetic code can include selenocysteine and—in certain archaea—pyrrolysine. Shortly after or even during synthesis, the residues in a protein are often chemically modified by post-translational modification, which alters the physical and chemical properties, folding, stability, activity, and ultimately, the function of the proteins. Some proteins have non-peptide groups attached, which can be called prosthetic groups or cofactors. Proteins can also work together to achieve a particular function, and they often associate to form stable protein complexes.
Once formed, proteins only exist for a certain period and are then degraded and recycled by the cell's machinery through the process of protein turnover. A protein's lifespan is measured in terms of its half-life and covers a wide range. They can exist for minutes or years with an average lifespan of 1–2 days in mammalian cells. Abnormal or misfolded proteins are degraded more rapidly either due to being targeted for destruction or due to being unstable.
Like other biological macromolecules such as polysaccharides and nucleic acids, proteins are essential parts of organisms and participate in virtually every process within cells. Many proteins are enzymes that catalyse biochemical reactions and are vital to metabolism. Proteins also have structural or mechanical functions, such as actin and myosin in muscle and the proteins in the cytoskeleton, which form a system of scaffolding that maintains cell shape. Other proteins are important in cell signaling, immune responses, cell adhesion, and the cell cycle. In animals, proteins are needed in the diet to provide the essential amino acids that cannot be synthesized. Digestion breaks the proteins down for use in the metabolism.
Proteins may be purified from other cellular components using a variety of techniques such as ultracentrifugation, precipitation, electrophoresis, and chromatography; the advent of genetic engineering has made possible a number of methods to facilitate purification. Methods commonly used to study protein structure and function include immunohistochemistry, site-directed mutagenesis, X-ray crystallography, nuclear magnetic resonance and mass spectrometry.

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  1. J

    Body can make anything such as proteins, fats etc from simple sugars

    I'm not a science student. So, please keep your reply simple and straightforward. Thank you. Human body needs water, carbohydrates, proteins, fats, and vitamins in order to function properly and survive. Please correct me if I'm wrong. I once read that apart from some essential amino acids...
  2. W

    Proteins' incorporation as a digestive enzyme in lysosome

    I am in ninth grade Biology. Homework Statement I have some essay prompts given to the class by my biology teacher ahead of time before the finals. She will pick on of the prompts randomly on the day of the finals and so I must be familiar with all of them. I realize it is unscrupulous of...
  3. S

    Biology Proteins in Plasma Membrane

    Homework Statement Describe the methods by which proteins are clustered in the plasma membrane. Homework Equations There are none really; it's theory. The Attempt at a Solution I understand that the proteins bond with the cytoskeleton (actin microfillaments and intermediate...
  4. A

    Do proteins denaturate at 10°C?

    Hi, i need to know if the proteins denaturate when cooled from body temperature to 10°C (50 F). To the best of my knowledge as a biologist, our proteins denaturate at 42°C or higher, but not at relatively low temperature, though i am not sure of the latter. Who can enlighten me?
  5. K

    S-layer proteins and storage

    An S-layer protein is 3nm is diameter. Calculate number of proteins per mm3 of membrane. If the protein is used to pattern a surface used for data storage - each protein molecule can position one magnetic particle (1bit) compare this type of storage with current hard disks. Just one...
  6. P

    Iso-electric point of proteins?

    I'm crystallizing apoferritin, and still don't understand what an iso-electric point is, despite reading a whole chapter of a book about it. What happens if the surrounding buffer solution is at the iso-electric point? Cheers!
  7. V

    Probability of finding a spherical cavity of a radius in proteins

    Homework Statement The hydrophobic effect is important in stabilizing the folding of globular proteins. This is because of the drive to reduce interfaces between hydrophobic side chains and the solvent, usually polar water. One can estimate the contributions from hydrophobic forces to protein...
  8. C

    Milk analysis? investigate the proteins

    For protein analysis, why is milk sample neutralised before the addition of formalin in Formol titration? could we say that... The proteins are too weak to be titrated directly with alkali,if formalin is added, it reacts with the -NH2 groups to form the methylene-amino(-N=CH2) group and...
  9. A

    The central dogma: proteins first?

    I recently borrowed the book Information Theory, Evolution, and the Origin of Life by Hubert Yockey. In it he points to the fact that there can be no code from the amino acid alphabet (about 20 symbols) to the RNA/DNA alphabet (64 3-letter codons, a second extension of the 4-symbol alphabet...
  10. L

    Help with Questions on Membrane Structure, Proteins & Vitamin E

    I have some questions that i am not sure...can u guys help me out ? 1. Which of the following is the best phrase to describe the modern view of membrane structure? a. Membranes are lipid-lipid bilayers. b. Membranes are lipid-lipid bilayers with associated proteins. c. Membranes are...
  11. L

    Difference between fibrous proteins and globular proteins

    Hey guys, can somebody helps me to understand better about fibrous vs globular protein please "So what is the main difference between fibrous proteins and globular proteins? Aside from the difference in shape (elongated vs. spheroidal) and solubility (insoluble vs. soluble), fibrous proteins...
  12. J

    Using Biuret Solution to Quantitatively Measure Proteins

    hi all! I was just thinking about organic compound indicators, and biuret solution for proteins crossed my mind. I know that it can be used to qualitatively tell the presence of proteins (peptide linkages) with a colour change. But is there a way that biuret solution can be used to take...
  13. M

    Can goats be genetically modified to produce medicinal proteins?

    Like as far as i know. They can be designed so they make certain proteins. So this allows goats to create proteins that are needed for insulin or the proteins for bulletproof vests. But say they are making proteins that are used in the body like insulin does this affect the goat's system at...
  14. N

    Hybrid protein which is composed of two proteins

    If you have a hybrid protein which is composed of two proteins that are very different from each other, will you be way less likely to be able to make the hybrid protein retain the original functions of one of the proteins/either of the proteins because of that? Thanks, Sorry for bothering you
  15. S

    Protein samples still in liquid form at -20C, Storage condition for proteins

    Dear folks, Please help me out. I store my purified protein samples at -20C and they are still at the liquid form (a few are frozen) at this temperature! :cry: I used Trizol kit to purify them and dissolved them in a solution of 9M urea, 4% CHAPS and 30mM Tris/HCl pH 8.5 buffer. They had...
  16. S

    Verifying Sizes of Human Pituitary Proteins

    Can anyone please help me to find the sizes (Da) for these human pituitary proteins? i have looked for them in Entrez and other bioinformatic sites, but am really not sure if they are right. Please, recheck them for me. Thanks a bunch! 1. Glycoprotein hormones alpha chain i have a vERY...
  17. S

    Purification of proteins from human tissue, SDS_PAGE

    I plan running SDS-PAGE to get the protein profile of human tissues. Which kit is best for this purpose and how can i measure the concentration of a mixture of different proteins? I can measure the protein concentration when it is just a single kind of protein in the mixture, but how about when...
  18. C

    Secondary/ tertiary structure of proteins

    Why does the secondary/ tertiary structure of a protein exist? Is it due to the fact that all the bonds in polypeptide are not straight as we tend to draw them? ie - bond angle, such as the 109.5 degrees for C-C, exist and also bonds are free to rotate unless hydrogen bonds are present. (as they...
  19. H

    Building blocks of proteins are the beta-amino acids

    Which of the following are true ? (a) Proteins range from a MW from about 3,000 to 1.0e6 g/mol (b) Fibrous proteins are the main component of Muscle,hair and cartilage (c) Building blocks of proteins are the beta-amino acids (d) Polar amino acid side...
  20. B

    Proteins synthesized in a cell

    I have been asked to describe the pathway the following types of proteins follow and where they are synthesized in the cell. (a) Soluble proteins meant to remain in cytoplasm- Here wouldn't this follow the pathway cytoplasm-ER-golgi-exocytosis\ (b) membrane proteins meant to remain...
  21. D

    Unravelling the Mystery of DNA, RNA and Proteins

    Are the whole processes of DNA, RNA, ribosomes, amino acids and proteins all just "chemical reactions" or is there something more to it? I know the way it works from DNA to protein but why? I understand this question might have a very complex anwser but a brief explanation would be...
  22. B

    Understanding DNA Binding Proteins: Mechanisms of Sequence Recognition

    In general how do DNA-Binding proteins bind to DNA? Many DNA-binding proteins bind to specific sequences of DNA bases. How do the proteins accomplish this sequence recognition. My answer: In general, DNA binding proteins possesses certain structural motifs, such as helixes, which enable...
  23. B

    How Do Antifreeze Proteins Help Antarctic Fish Survive the Cold?

    Anyone know the answer to this ridiculous problem Antarctic notothenioid fish avoid freezing in their perpetually icy environment because of an antifreeze protein that circulates in their blood. This evolutionary adaptation has allowed these fish to rise to dominance in the freezing southern...
  24. E

    Unraveling How Proteins Are Transported & Sorted in Cells

    Hi! If I could get an answer to this question I could understand biology a lot easier. In the cell interior, the endoplasmic Reticulum manufactures proteins and are then transported by a vesicle to the Golgi Apparatus where they are modified or processed and sorted. My question is, ''how do...
  25. V

    AGCTU, and all-important proteins

    <1> Can anyone tell me where these alphabets come from ? I mean who first used them to talk about genes' base ? <2> All life on Earth is proteins but is there any life without proteins ? Would you, biologists please tell me how you study enzymes in your labs ? I am not majoring in biology, I...
  26. FZ+

    Denaturising Proteins: Mechanism & Effects Explained

    Exactly what is the mechanism that makes proteins denature under certain conditions? (eg. too high temperature, pH etc etc) How does it all work?
  27. STAii

    Transport Proteins in Plasma Membrane

    Greetings. According to my textbook (again, this might not be really accurate because of translation): Now, here is my question : If proteins are just molecules (big ones i guess), how do they 'know' what the cell needs at a certain time (to let it into the cell) ? Thanks in advance.
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