Hexagonal Packing Factor - Functional Molecules

In summary, the conversation discusses estimating the number of functional molecules per square centimeter of substrate in a hexagonal close-packed structure with sulfur atoms spaced 4.99 Å apart. By calculating the area occupied by each sulfur atom and assuming a cross-sectional area for each functional molecule, the estimated number of molecules is approximately 1.65 × 10^13 molecules/cm2.
  • #1
VooDoo
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Homework Statement



the sulphur atoms in the self-assembled monolayers are ~ 4.99Å apart, and that they form a hexagonal close-pack structure, estimate the number of functional molecules/cm2 of the substrate

Homework Equations


1 angstrom = 1.0 × 10[itex]^{-10}[/itex] metres

Area of hexagon = 2.598t[itex]^{2}[/itex] where t=length of hexagon side

APF of a hexagonal structure = 0.74

The Attempt at a Solution



I have tried searching google, but the only solution I can come up with is:

Working out the area of the hexagon, by assuming that the 4.99Å is the length of the hexagon side. Then I believe a HCP structure has 7 atoms, therefore I divide the area calculated by 7 to get molecules/Å[itex]^{2}[/itex] which I convert to molecules/cm[itex]^{2}[/itex]

No idea if what I am doing is correct!
 
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  • #2
To estimate the number of functional molecules per square centimeter of substrate, we first need to calculate the area occupied by each molecule in the hexagonal close packed structures.

In HCP, the sulfur atoms are arranged in a hexagonal lattice with a spacing of 4.99 Å between neighboring atoms. The area of each unit cell in the HCP structure can be calculated as follows:

Area of unit cell = (3√3 / 2) × (4.99 Å)2 = 64.57 Å2

Since there are two sulfur atoms per unit cell, the area occupied by each sulfur atom can be calculated as:

Area per sulfur atom = 64.57 Å2 / 2 = 32.28 Å2

Now, we need to convert the area occupied by each sulfur atom to the area occupied by each functional molecule. Let's assume that each functional molecule contains one sulfur atom and has a cross-sectional area of A.

Then, the number of functional molecules per square centimeter can be calculated as:

Number of functional molecules/cm2 = (1 / A) × (1 / 32.28 Å2) × (10^8 Å2 / cm2)

Solving for the unknown parameter A, we get:

A = (1 / Number of functional molecules/cm2) × (32.28 Å2) × (10^-8 cm2/Å2)

Let's assume that there are N functional molecules per square centimeter. Then, substituting N for Number of functional molecules/cm2, we get:

A = (1 / N) × (32.28 Å2) × (10^-8 cm2/Å2)

Using the given information that the sulfur atoms are spaced 4.99 Å apart, we can calculate the cross-sectional area of each functional molecule as follows:

A = π × (4.99 Å / 2)^2 = 19.57 Å2

Substituting this value into the equation for A, we get:

N = (32.28 Å2) × (10^-8 cm2/Å2) / (19.57 Å2) = 1.65 × 10^13 molecules/cm2

Therefore, the estimated number of functional molecules per square centimeter of substrate is approximately 1.65 × 10^13.
 
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  • #3
trendingindia said:
To estimate the number of functional molecules per square centimeter of substrate, we first need to calculate the area occupied by each molecule in the hexagonal close packed structures.

In HCP, the sulfur atoms are arranged in a hexagonal lattice with a spacing of 4.99 Å between neighboring atoms. The area of each unit cell in the HCP structure can be calculated as follows:

Area of unit cell = (3√3 / 2) × (4.99 Å)2 = 64.57 Å2

Since there are two sulfur atoms per unit cell, the area occupied by each sulfur atom can be calculated as:

Area per sulfur atom = 64.57 Å2 / 2 = 32.28 Å2

Now, we need to convert the area occupied by each sulfur atom to the area occupied by each functional molecule. Let's assume that each functional molecule contains one sulfur atom and has a cross-sectional area of A.

Then, the number of functional molecules per square centimeter can be calculated as:

Number of functional molecules/cm2 = (1 / A) × (1 / 32.28 Å2) × (10^8 Å2 / cm2)

Solving for the unknown parameter A, we get:

A = (1 / Number of functional molecules/cm2) × (32.28 Å2) × (10^-8 cm2/Å2)

Let's assume that there are N functional molecules per square centimeter. Then, substituting N for Number of functional molecules/cm2, we get:

A = (1 / N) × (32.28 Å2) × (10^-8 cm2/Å2)

Using the given information that the sulfur atoms are spaced 4.99 Å apart, we can calculate the cross-sectional area of each functional molecule as follows:

A = π × (4.99 Å / 2)^2 = 19.57 Å2

Substituting this value into the equation for A, we get:

N = (32.28 Å2) × (10^-8 cm2/Å2) / (19.57 Å2) = 1.65 × 10^13 molecules/cm2

Therefore, the estimated number of functional molecules per square centimeter of substrate is approximately 1.65 × 10^13.
Welcome to PF. :smile:

We generally do not allow solutions of schoolwork threads to be posted, since the student must do the bulk of the work. But since this thread is 12 years old, we can assume the Original Poster (OP) has moved on from this course. :smile:
 
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  • #4
berkeman said:
Welcome to PF. :smile:

We generally do not allow solutions of schoolwork threads to be posted, since the student must do the bulk of the work. But since this thread is 12 years old, we can assume the Original Poster (OP) has moved on from this course. :smile:
my bet is it was posted just to post the link (note: they linked to a site that is - what a surprise - called exactly as their account here), so I will edit the link out (from BOTH posts)
 
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Likes BillTre

What is hexagonal packing factor?

Hexagonal packing factor is a measure of the efficiency of packing hexagonally shaped molecules in a given space. It is calculated by dividing the total volume of the molecules by the volume of the space they occupy.

How is hexagonal packing factor important in scientific research?

Hexagonal packing factor is important in understanding the physical properties of functional molecules and how they interact with each other. It can also be used to predict the stability and solubility of these molecules in different environments.

What are some examples of functional molecules that exhibit hexagonal packing?

Examples of functional molecules that exhibit hexagonal packing include proteins, lipids, and DNA. These molecules play important roles in biological processes and their packing efficiency can affect their function.

How is hexagonal packing factor different from other packing factors?

Hexagonal packing factor is specific to hexagonally shaped molecules, while other packing factors may be used for different shaped molecules. Additionally, hexagonal packing factor takes into account the number of molecules in the given space, rather than just the size of the molecules themselves.

How can hexagonal packing factor be manipulated or optimized?

Researchers can manipulate or optimize hexagonal packing factor by altering the size or shape of the molecules, as well as the conditions in which they are packed. This can be achieved through techniques such as chemical modification or changing the temperature and pressure of the environment.

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