Fluorescent Sample with Cuvette but not with Plate -- Why?

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SUMMARY

The discussion centers on the discrepancy in fluorescence readings between a cuvette and a 96 well plate in a fluorometric assay. The user reports successful fluorescence detection using a cuvette but not with a black, flat-bottomed, opaque 96 well plate from Greiner. Key factors affecting the results include the excitation and emission wavelengths (Exc. 468 nm, Em. 572 nm), the materials of the cuvette (fused silica, borosilicate glass, or quartz), and the sensitivity of the fluorometer used. It is concluded that plate readers are generally less sensitive than traditional cuvette fluorometers, which may contribute to the observed differences in fluorescence.

PREREQUISITES
  • Understanding of fluorometry and fluorescence principles
  • Familiarity with 96 well plate specifications and materials
  • Knowledge of excitation and emission wavelengths
  • Experience with different types of fluorometers and their configurations
NEXT STEPS
  • Investigate the differences in sensitivity between cuvette fluorometers and 96 well plate readers
  • Research the impact of well plate materials on fluorescence readings
  • Learn about the optimal positioning of detectors in fluorometric assays
  • Explore the specifications and performance of various fluorometers, particularly those designed for 96 well plates
USEFUL FOR

Researchers and laboratory technicians conducting fluorescence assays, particularly those using fluorometers and 96 well plates for bio-assays. This discussion is beneficial for anyone troubleshooting fluorescence detection issues in their experiments.

RooneyChemistry
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TL;DR
Fluorescent Sample with Cuvette but not with Plate
I am doing an assay where the formed compound is fluorescent when I use a cuvette in a fluorometer, but not when I put the same sample into the well of a 96 well plate. Why is this?

The fluorometer reads from the top and the plates I am using are 96 well plates, black, flat-bottomed well, opaque bottom, fluotrac from Greiner.

Exc. 468 nm, Em. 572 nm.
 
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What kind of fluorometer are you using? Exc from above or below?
 
Yeah we lack information here. What is the cuvette made out of? Fused silica? Borosilicate glass? Quartz? How about the well plate? I am also unsure what fluorometer excites from above. Most of them are sideways, where detection are perpendicular to the excitation path.
 
A 96 well fluoro reader couldn’t excite from the side, could it?
 
chemisttree said:
A 96 well fluoro reader couldn’t excite from the side, could it?
Maybe with tomography, LOL. A most expensive method.
 
Probably the sensitivity and different background noise of each instruments. Plate readers used in bio-assays are generally much less sensitive than traditional cuvette fluorometers. You could also get some background noise if your detector is not at a right angle from the light source.
 

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