Note that the authors are Bohmians, so they have a very different mindset than a typical practical physicist like you, which explains why you have difficulties with understanding their point. It's not about different interpretations of QM (most of the paper is about classical statistical mechanics, anyway), but about general way of thinking in physics. You mainly ask practical epistemic questions, while they ask foundational ontological questions. From their point of view, the most important quantity is the exact position and momentum of every particle, in a system of large number ##N## (typically, ##N\sim 10^{23}##) of particles, and everything else should be defined in terms of this. From your point of view, even though you will accept that in classical physics one can talk about exact positions and momenta in principle, it does not make much sense in practice when ##N## is so big. That's why you find the Gibbs point of view much more natural and can't easily understand why they prefer the Boltzmann point of view. Loosely speaking, Boltzmann entropy is better suited for foundational ontological questions, while Gibbs entropy is better suited for practical epistemic questions. And sometimes physicists (including me) are not certain whether a question is foundational or practical, which is a part of the reason why they often get confused by different notions of entropy.