What Determines the Net Force in a DNA Molecule?

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Homework Help Overview

The discussion revolves around estimating the net force between specific pairs of atoms in a DNA molecule, focusing on the electrostatic forces that hold the strands together. The subject area includes concepts from electrostatics and molecular biology.

Discussion Character

  • Exploratory, Mathematical reasoning, Problem interpretation

Approaches and Questions Raised

  • Participants discuss the electrostatic interactions between specific atoms in DNA, attempting to calculate forces based on given charges and distances. There is a focus on the bonds between thymine and adenine, as well as cytosine and guanine.

Discussion Status

Some participants have shared their attempts at calculations, including specific force equations and values derived from their reasoning. There is recognition of discrepancies between personal calculations and textbook answers, prompting further inquiry into the methods used and the textbook referenced.

Contextual Notes

Participants are working under the constraints of a homework assignment, which may limit the information available for problem-solving. The original poster expresses confusion regarding their calculations and seeks clarification on the problem setup.

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Net Force in a DNA molecule??

Homework Statement


The two strands of the helix-shaped DNA molecule are held together by electrostatic forces as shown in Fig. 16-44. Assume that the net average charge (due to electron sharing) indicated on H and N atoms is 0.2e and on the indicated C and O atoms is 0.4e. Assume also that atoms on each molecule are separated by 1.0 10-10 m


Estimate the net force between each of the following. For each bond (red dots consider only the three atoms in a line (two atoms on one molecule, one atom on the other)).
(a) a thymine and an adenine

(b) a cytosine and a guanine

(c) Estimate the total force for a DNA molecule containing 105 pairs of such molecules.



Homework Equations


F=k (q(1)q(2))/d^2 k=8.99E-9


The Attempt at a Solution

 

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I am trying to solve this same problem.

The two strands of the helix-shaped DNA molecule are held together by electrostatic forces as shown in figure 16-44. Assume that the net average charge (due to electron sharing) indicated on H and N atoms is 0.2e and on the indicated C and O atoms is 0.4e. Assume also that the atoms on each molecule are separated by 1.0 * 10^-10 m. Estimate the net force between a) a thymine and an adenine; b) a cytosine and a guanine. For each bond (red dots) consider only the three atoms in a line (two atoms on one molecule, one atom on another). c) Estimate the total force for a DNA molecule containing 10^5 pairs of such molecules.

Basically I started with (a) which was finding the force between thymine and adenine. They share an O-H-N bond (O being on the Thymine molecule, H and N being on the Adenine molecule) and a N-H-N bond (N and H on the Thymine, N being on the Adenine)

This question has had me sort of stumped for some time now. I've worked out what I thought was the solution, however I was incorrect. Here's what I thought was correct.

O-H-N bond

O and N are negative, H is positive

O...H---------N

Using our reading, I assumed I should consider them Q1 through Q3, each separated by r.

So we'd have:

Q1...Q2--------Q3

Since the bond (red dots) are between Q1 and Q2/Q3, I assumed I should find the net force on Q1

F12 = k[(Q1)(Q2)]/r^2 , where Q1 = .4e, Q2 = .2e, and r = 1.0 * 10^-10

Solving the equation I have F12 = 1.8432 * 10^-9 N

The same is then done for F13 (except that r = 2.0 * 10^10) , solving the equation I get F13 = 4.608 * 10^-10

As F12 is attractive and F13 is repulsive, I added the forces

F = 1.8432 * 10^-19 + (-4.608 * 10^-10) = 1.3824 * 10^-9

I did the exact same thing for the N----H...N bond as well (N being negative, H being positive), but for this I calculated the forces being applied to Q3 instead of Q1

The results where

F = 6.912 * 10^-10I then added the forces, as one of each bond exists between T & A, and was left with 2.0736 * 10^-10, which is unfortunately incorrect. The book shows the answer as being 4.6 * 10^-10.I understand this will be difficult to decipher without having the textbook figure. Attached is a picture of the figure from the text, I hope it helps.
 

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What textbook are/were you using for this problem?
 

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