Yes, it's the SI pest. I don't understand, why one has abandoned the good old tradition of presenting electromagnetism in the SI in the experimental course and in the Gaussian units in the theory course. The former is important, because the SI is the system of units used in experimental physics, and the units are well-defined and maintained by the all the national bureaus of standard (NIST in the US, PTB in Germany, etc.).
In theoretical physics, however, it's important to present the inner logic of the mathematical theories and models of our present understanding of nature, and the SI is not well suited for that purpose in regard of classical electrodynamics. The Gaussian system of units has this feature since the components of the electromagnetic field, [itex]\vec{E}[/itex] and [itex]\vec{B}[/itex] as well as the macroscopic auxilliary fields, [itex]\vec{D}[/itex] and [itex]\vec{H}[/itex] (note that these pairings belong together and not the traditional ones!) have the same units as it should be in the most natural setup according to the relativistic formulation of Maxwell's theory, which is the best one according to our present knowledge.
The only remaining "uglyness" of the Gaussian system is the appearance of factors [itex]4 \pi[/itex] in the fundamental equations. This is cured by using the rationalized Gauss units (or Heaviside-Lorentz units), which are the common standard in the theoretical high-energy physics community (who usually also puts [itex]c=\hbar=1[/itex], but that's not a good idea in the introductory course and not within classical physics, where [itex]\hbar[/itex] of course does not appear explicitly).