MisterX said:
Why use CT scans when non-ionizing MRI equipment is available?
They both have their advantages and disadvantages.
One of the major disadvantages of MRI is the time that it takes to acquire a scan. A lot can depend on the specific sequence you're using and the volume you're trying to reconstruct, but it's fairly typical for MRI times to run on the order of 10 minutes or more. In some cases patients can be inside the bore for half an hour. With a modern multislice CT you can take a large scan in a matter of seconds.
You also have "4D" capabilities with conventional CT scanners - meaning you can make a movie of someone breathing. This can be really important if you want to develop a radiation therapy treatment plan. I'm sure this can be done with an MRI as well, but I'm pretty sure it's not a conventional capability yet.
Another point is spatial distortions. It can be very difficult to set up an MRI to be free of spatial distortions because you need a very homogenous magnetic field and/or a reliable map of distortions in it. CT on the other hand tends to give very accurate spatial information.
So what all of this means is that there are some people who can't be candidates for an MRI study - they can't lie still for long enough, or they have material in them with a high magnetic susceptibility that will distort images that are taken. Or even worse, the high magnetic field can shift a piece of shrapnel around inside the body and cause serious damage.
Another factor is just the information that you get out. CT easily maps electron density information in a one to one manner, but MRI doesn't do this. So although you can see contrast in soft tissues more readily on MRI scans than on CT scans, you run into situations where the same grayscale value can come from different physical quantities.
Edit: Ygggdrasil beat me to this one.