The reference axis that you claimed you chose was one at rest at the position of impact of ball on bat. The reference axis you ended up using is apparently one at rest at the position of the center of mass of the bat just prior to impact.
Your insistence on invoking trig functions is also erroneous, but we need not go there. [The angular momentum of the spinning bat is constant -- it does not vary as the bat rotates]
Edit:
Looking more slowly through your most recent drawing, I see that this time the reference axis has not moved. That's good.
You show the ball rebounding at a speed of -v purely along the x axis. That may or may not be correct, depending on the mass of the bat and the coefficient of restitution. But since that motion is aligned with the axis of rotation, it is irrelevant.
You show one mass (a) representing the top end of the bat rotating counter-clockwise with a velocity of Va on a moment arm labelled Ra so that the velocity makes an angle "a" with the moment arm. That gives you an angular momentum term of ##m_a V_a\ sin\ a##
You show another mass (b) representing the bottom end of the bat also rotating counter-clockwise with a velocity of Vb. on a moment arm labelled Rb so that the velocity makes an angle b with the moment arm. That gives you an angular momentum term of ##m_b V_b\ sin\ b##
You claim that this sum is non-zero, that it is equal to "r x mv" and that it is equal to the angular momentum of the bat.
I agree that it is equal to the angular momentum of the bat.
I do not agree that it is equal to "r x mv" -- [actually it's r x 2mv but r=0, so that comes out OK]
I do not agree that is is non-zero.
Looking at a partially-rotated bat is not a particularly effective view. It adds unnecessary complexity to the problem. Better to look at the vertical bat immediately following the collision. Let us assume as is implicit in your most recent drawing that the ball collides exactly at the bottom end of the bat.
In that position, Va will be zero, Ra will be pointing straight up. sin a will be undefined but that is irrelevant. The angular momentum of mass a is zero.
Vb will be non-zero, Rb will be zero. sin b will be undefined but that is irrelevant. The angular momentum of mass b is zero.'
So the angular momentum of the bat is zero. By conservation of momentum, this angular momentum does not vary over time.
Edit again...
Now looking back at your depiction of the partially rotated bat, we see that you have drawn Va so that it points at an angle clockwise from the moment arm Ra. This is an important hazard when reasoning from drawings -- how do you know that the correct angle will not be counter-clockwise from the moment arm? In fact, it will be counter-clockwise as the top end of the bat begins to trace out a cycloid path. [I am fond of an apparently rigorous proof that all triangles are isoceles that proceeds based on a drawing with the same sort of flaw].