I'm going to cover what I need to make sense of this question. Hmm - may regret it deeply.
A comment and then an answer:
Your questions seem to me to reveal lots of deep misunderstandings about Biology mixed with correct facts. Since you are genuinely interested in Biology there are lots of High School level Biology books, maybe reading one might help you.
Answer: Phenotype is what you observe (Ex.: visually or with a blood test) , genotype is what your genetic material provides the plans for: a guide to protein synthesis and maybe subsequent metabolic processes to allow your body to display the phenotype. Maybe. So yes, you can give someone a new eye with a different eye color. You did NOT change any genes that create eye color. Why? the new eye was created inside another mother and had genes to create another color. Human eyes do not regrow, unfortunately.
Also, IMO, it is beyond extremely unlikely that you could successfully transplant an entire eye and get it wired up to work correctly given the state of modern Science. If we assume you can do that, then what we create with an eye transplant may be possibly considered a chimera. What's that? Did you ever see healthy plants that have blotchy leaves - like deep green and yellow - on the same leaf? That is a chimera. The bush has two different sets of genetic material in one organism. The one I have in mind is the result of a virus infection that persists from plant->seed->new plant.
Human-animal chimeras created in the lab - have been studied - this is a workshop announcement, note the ethical component:
http://osp.od.nih.gov/office-biotechnology-activities/event/2015-11-06-133000-2015-11-06-220000/workshop-research-animals-containing-human-cells.
Fraternal twins that fuse at a very early stage can create humans that are normal, but with two genotypes, not one:
https://en.wikipedia.org/wiki/Chimera_(genetics)#Humans
Another issue is gene expression or what is called incomplete (or partial) penetrance. Sometimes the organism has the genotype for a trait but does not "display" it. This was an explanation up until recently for odd eye colors. In a sense it is still correct, I guess.
Anyway, your blue-brown idea of eye color needs a serious tuneup:
https://en.wikipedia.org/wiki/Eye_color
More layman friendly:
http://sandwalk.blogspot.com/2007/02/genetics-of-eye-color.html