I travel through Blair Nebraska at least weekly, and have been driving by the Ft. Calhoun Generating Facility. I can see the plant from my home.
If you know where to look, when driving over the highway 30 bridge over the Missouri River, the break in the tree line along the 'old' channel is evident. Just east of the bridge, there is a site line through that gap, and the west bank of the 'old' channel (and the ethanol plant) can be seen. Further east on highway 30 (about a mile from the bridge) the channel on the east side of the little hill can be seen running southwards.
The rest of the details of the new channel, cutting the DeSoto road, flow through the old cutoff, and rejoining the Missouri south of the power plant have been noted by the locals involved in the flood fight. Access to various places along the river is difficult, roads and landmarks have been erased, and dangerous scour holes abound.
I am speculating here, as I am not a staffer of the plant or the NRC, but the major concern of lower possible flows past the plant might have to do with the waste heat dumped into the river coolant, and the increased thermal/reduced oxygenation resulting. There are some endangered fish and birds (pallid sturgeon and some kind of plover, as I recall). The Ft. Calhoun plant, as I recall, at 500MW, is the smallest operating (or would be operating if they do the restart) plant in the country. So the problem would be most apparent during low summer flows (assuming we ever get a 'normal' hot dry summer in this area again).
I suppose it seems somewhat odd to the rest of you that a 'problem' like this with a nuclear facility is going to be fixed by a bunch of farmers with tractors and shovels, but for around here, that would be pretty much business as usual. If anything goes horribly wrong, I'll post something about it here.