So let's see if I follow:
So in an atomic orbital, the electron is in an eigenstate, so there is no actual evolution of the system in time. And in the case of a perturbation, the wavefunctions are perturbed but we again say the electron is in an eigenstate and has no measurable time dependence, thus does not accelerate.
But when you bring large numbers of photons into it, do you come to agreement with the classical picture because, in these cases, it's no longer a simple perturbation and the electron DOES accelerate? Or in the quantum mechanical view, is it that the electron never accelerates at all, but the changing-Hamiltonian-perturbed-wavefunction picture can completely describe the observed radiation for any number of incident photons?