Usually the treatment is using "macroscopic electrodynamics", i.e., Maxwell's equations for ##\vec{E}##, ##\vec{B}## and ##\vec{D}## and ##\vec{H}## with consitutive equations motivated from linear-response theory (in very advanced special treatments the latter derived from quantum many-body theory). Then of course the microscopic picture that the electromagnetic field is due to the superposition of the incoming (external) em. field and the em. field from the motion of the charges in the material.
For a treatment in the latter spirit see the very nice textbook by Schwartz:
M. Schwartz, Principles of Electrodynamics, Dover Publications (1972)
It's a bit like a book with the didactical intentions of Purcell in the Berkeley physics book done right, though there are still some rough edges in there (e.g., the use of the concept of "relativistic mass").