I would suppose a "hotter" free atom would have a greater speed.
But there is more to heat than just atomic/molecular motions. There is electromagnetic flux, or if you prefer, photon flux. Of course, hot active atoms can produce this heat in the form of radiation. But here is an interesting special case from solar physics.
The temperature of the solar atmosphere above the photosphere (, where opacity drops off) suddenly starts increasing, until it hits 1 million K in the corona. The corona is an extension to the sun's atmosphere that helps produce the solar wind that reaches earth. The corona has a very tenuous (low) gas density. Some of the atoms in it produce light frequencies when their electrons drop from metastable levels. That means the atoms are left alone by other atoms long enough for the electron to make the drop after a sufficient delay. Why this high temperature? The radiation flux from the photosphere mostly travels through the corona out into space and become sunlight. If the corona really had a high matter-radiation equilibrium temperature, it would glow at visual and UV frequencies with such intensity that the sun itself would be completely hidden. Instead, the corona is only visible to us during total eclipses. Yet the corona emits xrays, and much more strongly than the solar atmosphere below. That indicates a very high temperature. So, corona has low density of emitters but very high temperature, according to the ionization states of its constituent atoms. There are theories about about this, but no sense of completion.
Here is some stuff to explore. links --->
http://science.nasa.gov/ssL/pad/solar/corona.htm
UCAR:the solar corona - movies
NASA:how is the solar corona heated?
from Prof. Paul J. Wiita, GSU Astronomy 1020 lecture:
THE SOLAR ATMOSPHERE
PHOTOSPHERE: visible, IR and UV continuum radiation streams out from here. Thickness about 400 km 4500 < T < 5800 K; usually say T_s = 5760 K density between 10^{-5} and 10^{-8} g/cm^3 emerging spectrum is continuum (from dense lower layer) with superposed absorption lines (from less dense, cooler outer layer)
CHROMOSPHERE: mostly UV emission line radiation
Irregular thickness, averaging 5000 km in SPICULES 4500 < T < 10,000 K (up to 50,000 K in transition zone) density averages around 10^{-10} g/cm^3 only visible when photosphere is obscured
CORONA: mostly X-ray emission Irregular thickness, typically out to 2-3 times Solar radius Average T = 1 x 10^6 K extremely low density only visible when photosphere is obscured or via X-ray telescopes heated via magnetic energy orginating in the convective zone of the sun: probably by both magnetohydrodynamic shocks and magnetic reconnection.
WIND: small amount of matter boiled off CORONA
Typical speed, 500 km/s (roughly the Sun's escape velocity) Mostly protons, Helium-4 nuclei (also called alpha particles) and electrons Continually hitting Earth's magnetosphere
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Why is the solar corona so hot, and what does that heat mean? That gets me back to your question.