What could be causing the error in my AMPAC semi-empirical calculation?

  • Thread starter Thread starter rvm
  • Start date Start date
AI Thread Summary
An undergraduate student is modeling a reaction using AMPAC semi-empirical methods and encountered an error related to vibrational data in their output file. The calculation identified two nodes as potential transition states, with node 5 showing two negative vibrations and node 8 showing one large negative vibration. The error message indicates a problem with reading vibrational frequency data, specifically "Bad Vibration = 8." Clarification is sought on when the error occurs during the calculation and the meaning of certain calculation settings. Understanding these aspects may help resolve the issue.
rvm
Messages
1
Reaction score
0
Hello,

I am an undergraduate student being introduced to the world of computational chemistry. I am modeling a reaction using AMPAC semi-empirical methods, and the output file included an error message. I would appreciate some insight.

The calculation is a chain calculation connecting two structures corresponding to a partial rotation of a molecular rotor. The calculation completed and marked two nodes as potential transition states (node 5 and node 8). Node 5 had two negative vibrations, Node 8 had a single large negative vibration.

My calculation settings:
pm6 rhf singlet fullchn lforce t=auto

Error message:
CconnectionAOut::GetAmpacVibrationData()
Bad Vibration = 8
Line Number 6495

Thank you,

RVM
 
Chemistry news on Phys.org
rvm said:
Hello,

I am an undergraduate student being introduced to the world of computational chemistry. I am modeling a reaction using AMPAC semi-empirical methods, and the output file included an error message. I would appreciate some insight.

The calculation is a chain calculation connecting two structures corresponding to a partial rotation of a molecular rotor. The calculation completed and marked two nodes as potential transition states (node 5 and node 8). Node 5 had two negative vibrations, Node 8 had a single large negative vibration.

My calculation settings:
pm6 rhf singlet fullchn lforce t=auto

Error message:
CconnectionAOut::GetAmpacVibrationData()
Bad Vibration = 8
Line Number 6495

Thank you,

RVM

Sorry, but I don't know much about AMPAC. However, I may still be able to help. The error sounds like it is arising from an attempt to read vibrational frequency data from some sort of input or temporary file. This might happen for any number of reasons.

Does the error arise at the beginning of the calculation when the input is read, or sometime later? Also, what do the calculation settings mean? I understand "pm6", "rhf" and "singlet", but what are the other settings?
 
It seems like a simple enough question: what is the solubility of epsom salt in water at 20°C? A graph or table showing how it varies with temperature would be a bonus. But upon searching the internet I have been unable to determine this with confidence. Wikipedia gives the value of 113g/100ml. But other sources disagree and I can't find a definitive source for the information. I even asked chatgpt but it couldn't be sure either. I thought, naively, that this would be easy to look up without...
I was introduced to the Octet Rule recently and make me wonder, why does 8 valence electrons or a full p orbital always make an element inert? What is so special with a full p orbital? Like take Calcium for an example, its outer orbital is filled but its only the s orbital thats filled so its still reactive not so much as the Alkaline metals but still pretty reactive. Can someone explain it to me? Thanks!!
Back
Top