somasimple said:
http://nobelprize.org/nobel_prizes/chemistry/laureates/2003/mackinnon-lecture.pdf
I think too.
Ok, now we are getting somewhere. Again, this discussion would be a lot more efficient if you would simply put your ideas out there first, rather than requiring extensive back-and-forth to try and deduce your ideas.
From:
http://www.nature.com/nature/journal/v414/n6859/full/414023a0.html
'The structure sketched out the molecular basis of this specificity: a narrow 'selectivity filter' in the shape of an oxygen-lined electronegative tunnel in which dehydrated K+ (but not Na+) fits precisely. This structure rationalized why a K+ ion is so willing to leave its thermodynamically comfortable home in aqueous solution to enter the pore in a largely dehydrated form; the channel interior mimics the embrace of the water molecules in the inner hydration shell surrounding the ion in solution.
[...]
'Potassium ions are now seen in seven distinct sites along the pore-axis (Fig. 1a). Four of these reside in the narrow selectivity filter, and one in the wider hydrated cavity, as described earlier. By solving structures at varying ion concentrations, MacKinnon and colleagues argue that the four selectivity-filter sites are not all occupied simultaneously; rather, a pair of K+ ions separated by a single water molecule shifts in a concerted fashion between two configurations within the filter — inner and outer — occupying each about half the time (Fig. 1b).
[...]
'Most dramatically, in the position closest to the pore entrance a K+ ion is caught in flagrante, coordinated in front by four protein carbonyl groups reaching outwards, and behind by solvent; this must represent the long-postulated 'dehydration transition state' in which the ion sheds its water while entering the pore. It is now seen not to be a high-energy transition-state at all, but rather a true intermediate, an integral part of the flat landscape.'
This is all well and good, but I don't what this has to do with Sodium channels, which you consider to be the sole driver of an action potential spike, nor does it have to do with 'collective behavior' of thousands of channels, nor does it have anything to do with properties of lipid bilayers.
Consequently, now it's entirely unclear exactly *what* question you are trying to answer; we started with a discussion of the electrical dynamics of an action potential, to talking about sodium channel dynamics, and now you are discussing potassium channels.
Please take a moment to write out a coherent post discussing *your ideas*. Because right now I feel like I am chasing a moving target.