Calculating Fragment Numbers: Biotechnology and Plasmids Explained

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SUMMARY

The discussion focuses on calculating the number of DNA fragments produced when a linear DNA strand of 150,000 base pairs is digested with a restriction enzyme that recognizes a seven-base-pair site. Participants clarify that the enzyme does not cut every seven base pairs but rather at specific recognition sites. The calculation using the formula 4^7 results in 16,384 possible recognition sites, leading to an approximate total of 9 fragments when dividing 150,000 by 16,384.

PREREQUISITES
  • Understanding of linear DNA structure and base pairs
  • Knowledge of restriction enzymes and their recognition sites
  • Basic mathematical skills for division and exponentiation
  • Familiarity with molecular biology terminology
NEXT STEPS
  • Research the various types of restriction enzymes and their specific recognition sequences
  • Learn about the process of DNA digestion and fragment analysis techniques
  • Explore the implications of fragment size on cloning and genetic engineering
  • Study the principles of calculating fragment numbers in different DNA contexts
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Biotechnologists, molecular biologists, and students studying genetics who seek to understand DNA manipulation and fragment analysis.

LadiesMan
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A piece of linear DNA is 150 000 base pairs in length and it is digested with a restriction enzyme that recognizes a seven-base-pair recognition site. How many fragments do you predict would be produced? Show your calculations.

I would say, 150000bp / 7 = 21428.57 fragments (Weird...)

What am I doing wrong?

Thanks
 
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A restriction enzyme cuts the DNA at the recognition site. Not every seven base pairs.
 
Hmm, but we don't know how many restriction enzymes are on that linear piece of DNA.
 
maybe:

4 nitrogenous pairs each base pair so 4^7 = 16384 (base pairs) then 150000 divide by 16384 which gives us 9.15 so approximately 9 fragments.
 

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