To obtain low frequency components accurately from high sample rate data, performing a direct FFT is recommended without prior low-pass filtering, as filtering may not provide additional benefits. The resolution of low frequencies is determined by the length of the FFT, so using a longer FFT will yield finer frequency bins. Increasing the sampling time can enhance the frequency resolution, as the total time of the sampled data is crucial for this aspect. It's important to note that the quality of the low frequency data is limited by the performance of the sampling circuit. Alternative methods to FFT may also yield precise frequency estimates with less data, depending on the specific analysis goals.