A first cause argument, eh?
Well, here's one for you: you can produce all the energy in matter you want in General Relativity without doing any work. Here's how you do it. The gravitational potential energy, which we see in what is known as the Hamiltonian formulation of General Relativity, is always negative. If you create a closed universe, the gravitational potential energy turns out to exactly cancel out the energy in the matter fields, and you end up with a universe that has total energy identically equal to zero, even if that universe ends up looking just like ours, complete with stars, galaxies, and people making bad arguments.
This sort of universe can, for instance, be started from a random quantum vacuum fluctuation. We haven't worked out all of the details of this sort of thing yet, but there's not any reason to believe it can't happen as a necessary consequence of quantum mechanics coupled with gravity.
Anyway, on a more philosophical point, to my mind the more sophisticated apologists moved on from the "first cause" argument a long time ago, and now pursue "prime cause" arguments. The idea with a prime cause argument is not so much that there must be a terminating sequence of causes into the past, but rather that for everything that happens in our universe, there is something that causes that sort of thing to happen, eventually terminating at a "prime cause". That is to say, if a new region of space-time can be born through a random quantum vacuum fluctuation, then that sort of fluctuation exists only as a consequence of physical laws. Those physical laws themselves must also exist as a consequence of something else, eventually terminating at some "prime cause".
What undercuts the intent of most people making this sort of argument is that this prime cause could be nothing more than a single principle like, "all mathematical structures have real existence." See, for example, this paper by Max Tegmark discussing this hypothesis:
http://arxiv.org/abs/0704.0646
I do hope your professor was arguing, however, just for a place for philosophy within science, not for a god. Because there is definitely a place for philosophy within science. The above principle, for example, is a metaphysical principle. But your metaphysics had better be chained to reality through experiment and observation, or you're pretty much guaranteeing that you'll get it wrong.