The stress-energy tensor T contains the source terms. In Newtonian theory mass could be considered to be the source of gravity, but in General Relativity the source terms contained in the stress-energy tensor T are energy, momentum, and pressure. However, the stress-energy tensor is not like the E and B fields in classical mechanics, and there is no general way to localize energy in GR as there is in electromagnetism.
http://en.wikipedia.org/w/index.php?title=Mass_in_general_relativity&oldid=366036138
The main reason for this is that "gravitational field energy" is not a part of the energy-momentum tensor; instead, what might be identified as the contribution of the gravitational field to a total energy is part of the Einstein tensor on the other side of Einstein's equation (and, as such, a consequence of these equations' non-linearity).
There's another way of looking at the problem that might also be helpful. The conservation of energy is, in general, associated with a time translation symmetry by Noether's theorem. In particular, if one has a one-parameter sort of symmetry, there is a corresponding conserved quantity.
In flat space-time, or in Newtonian mechanics, space-time always has the required symmetry. In GR, this is not necessarily the case. However, in those cases in which the necessary time-translation symmetry exists (static or stationary space-times, for instance, or asymptotically flat space-times), the time-translation symmetry of the space-time does give rise to a useful notion of globally conserved energy.
None of this should be taken to mean that GR doesn't have a local notion of conserved energy. The stress-energy tensor has to obey a law that it's divergence is zero, which can be considered to be a form of local energy conservation. But these local laws volume don't allow one to assign a global number E to some particular system of non-zero volume and state that that is the energy of the system (or contained within the volume).
The topic is rather technical - the best reference on the topic is probably Wald, though as I mentioned MTW has some information on it too. There's only so much one can do in a post such as this. On a less technical level, one might try
http://www.desy.de/user/projects/Physics/Relativity/GR/energy_gr.html.