The Bob,
I'm going to be a little harsh on you and point out some of the errors in your argument. I hope this will help elucidate what makes for a sound scientific argument and what doesn't. I intend no ill-will.
The Bob said:
... Infrared radiation affects the electrons more (because the bonds vibrate due to electron contraction due to increase and decrease in energy)
What is electron contraction ? There is no such thing that I'm aware of. Also, what do you mean by "bonds vibrate" ? A bond is merely a spatial configuration of electron density. To make a bond vibrate, you must vibrate the things that are responsible for the bonds. Some of the modes of "vibration" of this bond would necessarily involve the motion of the nucleii relative to each other. In an isolated diatomic molecule, the primary mode of vibration involves changing the internuclear spacing.
and UV and visible light affect the ionisation energy and have the capability to release an electron from the hold of the nucleus.
Do not say that they "affect the ionisation energy". They do not. The ionisation energy remains practically unchanged/unaffected.
The energy of an isolated atom can be crudely written down as the sum of three terms : (1) the KE of the nucleus, (2) the KE of the electrons, and (3) the PE from the electrostatic interaction between the electrons and the nucleus (for now, we neglect the interactions between electrons themselves). When a photon ionises an electron, it changes (2) and (3)...so how is one justified in saying that only electrons are affected ?
Gamma rays affect the nucleus.
How ? What happens to the nucleus when you shine gamma rays on an atom ?
I may be wrong but Bohr's model uses a hydogren atom and different regions of electron excitment depend on the frequency of the radiation the electron absorbs.
What are "regions of electron excitement" ? You are right if you mean that different electronic transitions involve different frequencies. But even the term "electronic transition" refers to transitions between levels that are created by the electron's interaction with the nucleus.
Just because it is a molecule should not make too much difference to what absorbs the energy.
You have not shown why it is logically consistent to extend previous ideas from a hydrogen-like atom to say, a large polysaccharide.
Because of the wavelength there is some disagreement (microwaves for one)
"Disagreement" over what ?
but anything higher than this (infrared) must surely be electron based.
"Electron based" ? You are once again using imprecise terminology. Didn't you just say something about gamma rays and the nucleus ?
Bonds are due to electrons
But are they due to electrons alone ? Would I expect identical structures from isoelelctronic molecules/radicals ?
and so to make then vibrate it must be the electrons that are affected (most if not completely).
Where is the justification for the part within brackets - "most if not completely" ?