tastoon, Welcome to Physics Forums!
To search for answers to your question I entered the search terms "tuning fork resonate air column" and got lots of hits. Here are two sites which may help explain the difference between "natural frequency of the tuning fork" and "resonant frequency of the open tube". The key is that odd harmonics resonate also.
"The various possible frequencies at which a tube may resonate are definite and fixed in value. They depend upon the length of the pipe and the velocity of sound in air. In a cylinder of air, the length (L) of the column of molecules vibrating must be some odd number multiple of the wavelength of the tuning fork oscillation:
n l = 4 L
In this equation: n = an odd integer (1, 3, 5, ..); l is the wavelength of the sound wave; and L is the length of the air column."
http://chemmovies.unl.edu/chemistry/dochem/DoChem028.html
A simple experiment you can do to search for odd harmonics of tuning fork:
http://www.lhup.edu/~dsimanek/scenario/labman2/soundvel.htm
Cheers,
Bobbywhy