Hello Seyed,
I'm not an expert on this topic, so I might not explain this correctly, but I will try to give my view on your question.
The state of the composite system is basically a Bell state. So to get this in a maybe more familiar form, I will replace |z+\rangle and |F_{z+}\rangle with |\uparrow\rangle, and I similarly |z-\rangle and |F_{z-}\rangle with |\downarrow\rangle
|\phi\rangle_{SF} = \frac{1}{\sqrt{2}} \left(|\uparrow\rangle_S |\uparrow\rangle_F + |\downarrow\rangle_S |\downarrow\rangle_F\right)
If Wigner does a measurement in the basis \{|\uparrow\uparrow\rangle,|\uparrow\downarrow\rangle,|\downarrow\uparrow\rangle,|\downarrow\downarrow\rangle\} (which is basically just looking at the measurement result and asking the friend about the measurement result), then he will measure |\uparrow\uparrow\rangle with 50% probability and |\downarrow\downarrow\rangle with 50% probability. But if we add a phase e^{i\alpha}
|\phi\rangle_{SF} = \frac{1}{\sqrt{2}} \left(|\uparrow\uparrow\rangle + e^{i\alpha}|\downarrow\downarrow\rangle\right)
and measure in the same basis, then we still get |\uparrow\uparrow\rangle with 50% probability and |\downarrow\downarrow\rangle with 50% probability. So if we just can measure in this basis, we cannot distinguish this state from a incoherent mixture of 50% |\uparrow\uparrow\rangle and 50% |\downarrow\downarrow\rangle. That just means that the state is already in |\uparrow\uparrow\rangle or |\downarrow\downarrow\rangle before measurement, just with a classical 50-50 probality. This means we have no information about the phase.
As stated further down in that paragraph, if we can measure in a different basis, like the Bell basis
\left\{\frac{1}{\sqrt{2}} \left(|\uparrow\uparrow\rangle \pm |\downarrow\downarrow\rangle\right), \frac{1}{\sqrt{2}} \left(|\uparrow\downarrow\rangle \pm |\downarrow\uparrow\rangle\right)\right\}
then we will measure \frac{1}{\sqrt{2}} \left(|\uparrow\uparrow\rangle +|\downarrow\downarrow\rangle\right) with 100% probability, so we actually know the exact state, and with that also the phase.
I hope this helps a bit. Best wishes,
Arne
Edit: I just realized that I didn't really answer your question. So lack of control could in this context just mean, that we only can measure in the \{|\uparrow\uparrow\rangle,|\uparrow\downarrow\rangle,|\downarrow\uparrow\rangle,|\downarrow\downarrow\rangle\} basis and therefore cannot distinguish between a coherent state and a probabilistic mixture, and do not have knowledge about the phase. If we can measure in another basis, we might actually be able to determine the state and with that the phase.
Edit 2: I maybe should also add, that this is a thought experiment to explore different
interpretations of quantum mechanics and maybe reveal paradoxes in some of them. To my knowledge there is no way to actually do a Bell state measurement on a person + a QM system. On a quantum computer for example, one would apply operations to turn the Bell state measurement into a measurement in a basis that is actually available. But on a person + a QM system it is not really possible to perform these operations. And further, determining the exact state of a system with one type of measurement, the state of the system has to be in the basis that we measure. Usually to determine the exact state or even a probabilistic mixture (e.g. the complete density matrix), one has to perform a state tomography
https://en.wikipedia.org/wiki/Quantum_tomography .