How do O2 molecules from solution get into ATP?

  • Thread starter Thread starter Kuzon
  • Start date Start date
  • Tags Tags
    Molecules
AI Thread Summary
The discussion centers on the hydrolysis of ATP in the presence of water labeled with the oxygen isotope 18O. When ATP is hydrolyzed, it releases a phosphate molecule that contains 18O, while the remaining ADP incorporates an H atom from the labeled water. The hydrolysis process is facilitated by the weak bond strength between the outer phosphates of ATP, which allows water molecules to interact and break these bonds. The ATPase enzyme acts as a catalyst in this reaction. The mechanism involves the enzyme-bound ATP being attacked by the 18O-labeled water, resulting in the formation of enzyme-bound ADP and phosphate. During the reversible reaction, the phosphate can rotate, leading to the incorporation of the labeled oxygen into the remaining ATP, explaining the presence of 18O in the isolated ATP after hydrolysis.
Kuzon
Messages
42
Reaction score
5
This was a practice exam Q:
ATP is added to the myosin ATPase domain in water labeled with an oxygen isotope. After 50% of the ATP has been hydrolyzed, the remaining ATP is isolated and found to contain 18O. Explain.

I get how H2O is used in order to regenerate ATP from the Pi and ADP, but on all the diagrams I've seen online I can't see where the oxygen from that H2O goes.
 
Biology news on Phys.org
Kuzon said:
This was a practice exam Q:
ATP is added to the myosin ATPase domain in water labeled with an oxygen isotope. After 50% of the ATP has been hydrolyzed, the remaining ATP is isolated and found to contain 18O. Explain.

I get how H2O is used in order to regenerate ATP from the Pi and ADP, but on all the diagrams I've seen online I can't see where the oxygen from that H2O goes.
I assume that the water is H218O (18O being the isotope of O with atomic mass 18). The water hydrolyses the ATP releasing a phosphate molecule. That phosphate will contain an 18O atom and the now ADP molecule takes an H atom from the H218O. There must be a free H.

AM
 
Last edited:
Andrew Mason said:
I assume that the water is H218O (18O being the isotope of O with atomic mass 18). The water hydrolyses the ATP releasing a phosphate molecule. That phosphate will contain an 18O atom and the now ADP molecule takes an H atom from the H218O. There must be a free H.

AM
I don't really understand the explanation. How can water hydrolyse the ATP when hydrolysis is a reaction... It's not like water is a catalyst?
 
Kuzon said:
I don't really understand the explanation. How can water hydrolyse the ATP when hydrolysis is a reaction... It's not like water is a catalyst?
The bond strength between the outer phosphates in the ATP is weak because of the strain due to strong repulsion forces between them. That strain is enough so that the bonds can be broken by hydrogen bonding with water molecules. ATPase enzymes act as a catalyst. There is a great deal of energy released once the bonds are broken because of large the repulsive coulomb forces between these phosphates.

AM
 
Last edited:
The actual mechanism by which ATP hydrolysis occurs is the subject of this paper, which you may find interesting.

AM
 
I'm sorry I saw this thread so late. I think that reference, part of vast, important and fascinating story or stories may be too complicated and specialised for the general question and principle here.

What is happening is this: O18 labelled water attacks the enzyme-bound ATP creating enzyme-bound ADP and enzyme-bound O18-labelled Pi. While bound to the enzyme, this reaction is reversible. If it were reversed exactly, then the same labelled oxygen atom that had been Incprporated would be expelled of course. But all four O atoms of Pi are chemically equivalent. The enzyme-bound phosphate ion can rotate while sitting in the enzyme, and so the oxygen atom expelled in the reverse reaction will often be not the same one as entered and thus the ATP is reconstituted containing O18.
 
Chagas disease, long considered only a threat abroad, is established in California and the Southern U.S. According to articles in the Los Angeles Times, "Chagas disease, long considered only a threat abroad, is established in California and the Southern U.S.", and "Kissing bugs bring deadly disease to California". LA Times requires a subscription. Related article -...
I am reading Nicholas Wade's book A Troublesome Inheritance. Please let's not make this thread a critique about the merits or demerits of the book. This thread is my attempt to understanding the evidence that Natural Selection in the human genome was recent and regional. On Page 103 of A Troublesome Inheritance, Wade writes the following: "The regional nature of selection was first made evident in a genomewide scan undertaken by Jonathan Pritchard, a population geneticist at the...
I use ethanol for cleaning glassware and resin 3D prints. The glassware is sometimes used for food. If possible, I'd prefer to only keep one grade of ethanol on hand. I've made sugar mash, but that is hardly the least expensive feedstock for ethanol. I had given some thought to using wheat flour, and for this I would need a source for amylase enzyme (relevant data, but not the core question). I am now considering animal feed that I have access to for 20 cents per pound. This is a...
Back
Top