Well, you know that power is the rate of doing work. So you can work out how much work has been done in accelerating. Yes?
Now you also know that work = Force * distance.
You don't know what the distance is - but you do know it is the same for both runs so there's a good chance it will cancel - so just call it s.
We also know that s =1/2 * a * t^2 and f = m * a (Newtons equations)
So s=1/2 * f/m * t^2
m and s are constants so f * t^2 must be a constant.
i.e f1 * t1 ^2 = f2 * t2^2 ( calling the force and time for each run 1 and 2)
So if we multiply each side by s, we get
s * f1 * t1^2 = s * f2 * t2^2
but s* f is the work done in each run, so now we have a simple formula relating the work done to the time of the run ... and we know the work done.