How to calculate species abundance and diversity

AI Thread Summary
To calculate species abundance and diversity, the Shannon index formula H' is used, which incorporates the natural logarithm and requires summing the contributions of each species. The formula is H' = -Σ (n_i/N) ln(n_i/N), where n_i is the number of individuals of species i, N is the total number of individuals, and S is the number of species. Participants discussed how to apply the formula to specific species counts, such as ants, grasshoppers, pill bugs, and spiders, emphasizing the need to sum all species contributions for a complete calculation. Clarifications were made regarding the use of the sigma symbol and the natural logarithm in the calculations. Understanding these components is essential for accurately assessing species diversity in ecological studies.
blicker
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Homework Statement


This is the sample population taken along a 5m transect:
ants:9
grasshoppers:1
pill bugs:4
spiders:1


Homework Equations


What formulas would i use to calculate the species abundance and diversity?


The Attempt at a Solution


I only know this formula H'=-\Sigma (n_{}i/N)xIn(n_{}i/N) and i don't know what to do with this formula.
 
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Hi blicker! :smile:

Can it be that your formula is actually:
3799228b95da61aa2eca76e4132f0aa2.png

where "ln" is the natural logarithm (and also a button on your calculator), and where ni is the number of individuals of species i?

See: http://en.wikipedia.org/wiki/Shannon_index
 
yes that's it! but i don't know what numbers go where or how to calculate it. like would i include the sigma symbol and the letters above and below it?
 
The sigma symbol indicates that you have to sum.
So:
H'=-\sum_{i=1}^S {n_i \over N} \ln {n_i \over N} = -({n_1 \over N} \ln {n_1 \over N} + {n_2 \over N} \ln {n_2 \over N} + {n_3 \over N} \ln {n_3 \over N} + {n_4 \over N} \ln {n_4 \over N})

From wiki:
* ni The number of individuals in species i; the abundance of species i.
* S The number of species. Also called species richness.
* N The total number of all individuals
* pi The relative abundance of each species, calculated as the proportion of individuals of a given species to the total number of individuals in the community: n_i\over N
 
so would the equation for ants look like this:
-(9/15)In(9/15)
 
blicker said:
so would the equation for ants look like this:
-(9/15)In(9/15)

Well, Shannon's index specifies to sum all the terms.
So what you mention is only part of H'.

Btw, it is ln ("logarithmus naturalis").But I can't really tell you what your problem asks.
I'm not studying whatever science you're studying - I'm a mathematician.

I did find this article about diversity: http://en.wikipedia.org/wiki/Diversity_Index
And apparently n_i is the "species abundance".
Furthermore p_i={n_i \over N} is the "relative species abundance".
 
well thanks for your help anyway.
 
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