By holding the other coordinates constant, you are able to do the integral, sure. But when you take the exterior derivative of both sides, you obtain
dT = \frac{\partial}{\partial x^\alpha} \Big( \int^{x^0} \sqrt{g_{00}(t',x^1,x^2,x^3)} \; dt' \Big) dx^\alpha
which is a closed 1-form, but it is not a 1-form that fits nicely into your metric! It has a bunch of dx^1,\ dx^2,\ dx^3 terms in addition to dx^0. You will run into a similar problem with the rest of your integrals.
You should see now why the above claim is false. The point is that you have a system of differential equations (i.e., a bunch of 1-forms which you assume can be written as dx^\alpha for some coordinate functions x^\alpha), and this system of differential equations is not integrable in any finite-sized open region, in general.