That is true. Fair enough. But aside from that, I want to know what happens along the way, not just at the endpoints. If it's not under the umbrella of thermodynamics, in what area of science may my question be asked?
Since we can choose the initial and final states as we please, it is possible to get the information at every point of the path (remember, it must be a reversible path). Along non-reversible paths the system will not be in a state of equilibrium and the properties of the system accordingly will be ill-defined.
Since your question concerns entropy, if and when you understand entropy well, you will find your question does not hold good - the question would disappear.
Entropy Generation Definition:
Entropy generated (Sgen) during a process is a measure of the irreversibilities of that process.
Lets say you have a device that is rougher in one area than another and when the parts move in the device, more friction occurs as the parts make contact with the rough area.
The rate of entropy generation would be positive through this rough patch because the device introduces more irreversibility (friction) here. Then as your parts go back to moving smoothly and they are not touching the rough area, the friction subsides and the rate of entropy generation would be negative.
Does this make sense? This would make it sound like the rate of entropy generation could be negative.