Factoring dilutions into calculations

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Discussion Overview

The discussion revolves around calculating the concentration of plasmid DNA after dilution in a laboratory setting. Participants explore the correct method for factoring in dilution when measuring absorbance using a spectrophotometer, with a focus on the formula and the interpretation of absorbance values.

Discussion Character

  • Homework-related
  • Mathematical reasoning

Main Points Raised

  • One participant describes a laboratory session involving the dilution of plasmid DNA and the need to calculate its concentration based on absorbance measurements.
  • Another participant suggests that the dilution factor is 20, based on the ratio of DNA volume to total volume.
  • A formula for calculating DNA concentration is proposed, involving net absorbance and dilution factor.
  • There is a clarification regarding the calculation of net absorbance, with one participant questioning the initial description and correcting it to sample minus blank.
  • Participants discuss the term "DNA constance," confirming it refers to the concentration value mentioned earlier.

Areas of Agreement / Disagreement

Participants agree on the need to calculate the concentration of plasmid DNA and the general approach to the dilution factor. However, there is a minor disagreement regarding the calculation of net absorbance, which is clarified but not fully resolved in terms of its implications.

Contextual Notes

There are assumptions regarding the definitions of terms like "net A260" and "DNA constance," which may depend on specific laboratory practices. The discussion does not resolve all uncertainties related to the calculations.

sven222
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Hey guys, gals (Monique :wink: )

Quick question. I recently completed a labortatory session in my Genetics class regarding the isolation and analysis of plasmid DNA, and a section of the report has me stumped.

Before the plasmid DNA was put under the spectrophotometer, it was diluted in 285µl of distilled water (15µl of DNA, all up 300µl). Absorbance was measured, and found to be around 0.2 (Don't have the exact figures on me). Now assuming A=1 is the equivelant of 50µg/ml, we need to calculate the concentration of the plasmid DNA sample, taking into consideration the dilution.

I realize this is simple maths, but for some reason when it comes to facotring dilutions into my calculations, my brain laughs at me and tells me where to go. So I need your help guys :)

Thanks in advance.
 
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Your dilution factor is 20 because 15 in 300 give you a 5*10-2 dilution which is 1/20.

The formula to calculate DNA concentration is usually as follow

(Net A260)*(dilution factor)*(DNA constance)

Net A260=(Blank A260)-(sample A260)
 
Thanks for the reply iansmith, greatly appreciated.

Firstly, wouldn't the net A260 be sample - blank? Rather than blank - sample?

And when you say DNA constance, I assume you're referring to the 50ug/ml I mentioned above.

Besides that, I didn't realize it was that simple. It must be the lack of sleep, or the week old food I've been eating.

Thanks a heap :smile:
 
Originally posted by sven222
Firstly, wouldn't the net A260 be sample - blank? Rather than blank - sample?

my mistake it is sample-blank

Originally posted by sven222
And when you say DNA constance, I assume you're referring to the 50ug/ml I mentioned above.

yes it is
 

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